Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 Gm36247-201ENSMUST00000211834 285 ntBASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 Gm4263-202ENSMUST00000221392 667 ntBASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Upf3aQ3ULJ3 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Upf3aQ3ULJ3 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Upf3aQ3ULJ3 Gm23063-201ENSMUST00000102350 93 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm649-201ENSMUST00000117284 1054 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm5384-201ENSMUST00000120313 463 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm6762-201ENSMUST00000121769 289 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm12095-201ENSMUST00000121962 816 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm14840-201ENSMUST00000122135 594 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm24537-201ENSMUST00000157950 102 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm43651-201ENSMUST00000199796 439 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm7624-201ENSMUST00000209702 435 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm17989-201ENSMUST00000211543 412 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm4928-201ENSMUST00000219622 850 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Diaph3-206ENSMUST00000226745 713 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Snora31-201ENSMUST00000083213 130 ntBASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Upf3aQ3ULJ3 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm26143-201ENSMUST00000104480 108 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm15019-201ENSMUST00000120148 434 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm14101-201ENSMUST00000121502 473 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm12998-201ENSMUST00000122445 789 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm25839-201ENSMUST00000158921 103 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm16490-201ENSMUST00000165299 351 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm6486-201ENSMUST00000166202 434 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm28030-201ENSMUST00000184987 138 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm28439-201ENSMUST00000187714 876 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm37085-201ENSMUST00000193780 196 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm19726-201ENSMUST00000205008 240 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm18387-201ENSMUST00000220333 702 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 CT030254.3-201ENSMUST00000225959 1231 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Upf3aQ3ULJ3 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm14581-201ENSMUST00000121726 198 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm23791-201ENSMUST00000122553 293 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm24930-201ENSMUST00000158315 83 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm25490-201ENSMUST00000158734 130 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm15508-201ENSMUST00000160330 325 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm3851-201ENSMUST00000168653 318 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Mir5098-201ENSMUST00000175320 82 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm27718-201ENSMUST00000183721 86 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Mir6413-201ENSMUST00000184049 108 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm29038-201ENSMUST00000191543 678 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm32340-201ENSMUST00000192883 259 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm6510-201ENSMUST00000195916 574 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Trdv3-201ENSMUST00000198551 309 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms