Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm45317-201ENSMUST00000210385 223 ntBASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Gm45742-201ENSMUST00000212400 433 ntBASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.92□□□□□ -1.78
Brf2Q3UAW9 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Brf2Q3UAW9 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm23691-201ENSMUST00000101878 107 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Mir599-201ENSMUST00000102378 88 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm14688-201ENSMUST00000119169 303 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm5379-201ENSMUST00000120973 826 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm14253-201ENSMUST00000122112 639 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm24962-201ENSMUST00000157917 109 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm24898-201ENSMUST00000158133 106 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm5252-201ENSMUST00000189030 909 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm42857-201ENSMUST00000200823 339 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm44688-201ENSMUST00000209083 537 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm46327-201ENSMUST00000218240 365 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm5471-201ENSMUST00000072732 337 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Brf2Q3UAW9 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Brf2Q3UAW9 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Brf2Q3UAW9 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm11698-201ENSMUST00000117948 455 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm14586-201ENSMUST00000119571 408 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm11830-201ENSMUST00000120175 561 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm2005-201ENSMUST00000120759 542 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm12358-201ENSMUST00000121842 520 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm25908-201ENSMUST00000157624 98 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm26171-201ENSMUST00000158422 131 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm14527-201ENSMUST00000179300 639 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm37878-201ENSMUST00000192108 387 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm37836-201ENSMUST00000195875 175 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm44032-201ENSMUST00000204841 166 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm44259-201ENSMUST00000204996 298 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm29817-201ENSMUST00000210098 172 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 Gm46136-201ENSMUST00000214730 565 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.9□□□□□ -1.79
Brf2Q3UAW9 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.9□□□□□ -1.79
Brf2Q3UAW9 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms