Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm9512-201ENSMUST00000223112 497 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Olfr203-201ENSMUST00000089305 924 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm43326-201ENSMUST00000198459 1638 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 AC107645.1-201ENSMUST00000228660 1810 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 AC121942.1-201ENSMUST00000224459 2891 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col8a1Q00780 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col8a1Q00780 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Col8a1Q00780 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.4□□□□□ -1.7
Col8a1Q00780 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.4□□□□□ -1.7
Col8a1Q00780 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Col8a1Q00780 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm23578-201ENSMUST00000103943 104 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm22266-201ENSMUST00000104011 138 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm11221-201ENSMUST00000117230 597 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm11219-201ENSMUST00000118565 358 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Defa-ps11-201ENSMUST00000119719 299 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm12422-201ENSMUST00000121431 302 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm25913-201ENSMUST00000157617 135 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm8292-201ENSMUST00000162574 396 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm23191-201ENSMUST00000179147 107 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Mir6391-201ENSMUST00000184391 104 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm27492-201ENSMUST00000185194 187 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm37878-201ENSMUST00000192108 387 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm18403-201ENSMUST00000192907 529 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm37495-201ENSMUST00000194590 264 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm22897-202ENSMUST00000197782 127 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm17951-201ENSMUST00000198536 496 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm4734-201ENSMUST00000200117 777 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.4□□□□□ -1.71
Col8a1Q00780 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC4.4□□□□□ -1.71
Col8a1Q00780 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col8a1Q00780 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 AC109172.1-201ENSMUST00000227503 187 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm25853-201ENSMUST00000082793 132 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm25699-201ENSMUST00000082896 167 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm25579-201ENSMUST00000083407 106 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col8a1Q00780 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col8a1Q00780 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col8a1Q00780 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col8a1Q00780 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col8a1Q00780 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col8a1Q00780 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col8a1Q00780 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Col8a1Q00780 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col8a1Q00780 AC112972.2-201ENSMUST00000228702 2210 ntBASIC4.4□□□□□ -1.71
Col8a1Q00780 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Col8a1Q00780 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC4.39□□□□□ -1.71
Col8a1Q00780 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col8a1Q00780 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col8a1Q00780 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Snord66-201ENSMUST00000104051 75 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm15772-201ENSMUST00000118533 438 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm15493-201ENSMUST00000119461 528 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm11403-201ENSMUST00000122195 369 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm23581-201ENSMUST00000158531 63 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm21999-201ENSMUST00000165985 387 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm23872-201ENSMUST00000175432 77 ntBASIC4.39□□□□□ -1.71
Col8a1Q00780 Gm22716-201ENSMUST00000177596 107 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms