Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm23112-201ENSMUST00000158606 125 ntBASIC4.23□□□□□ -1.73
CiitaP79621 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CiitaP79621 Gm7094-201ENSMUST00000178379 366 ntBASIC4.23□□□□□ -1.73
CiitaP79621 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.23□□□□□ -1.73
CiitaP79621 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.23□□□□□ -1.73
CiitaP79621 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.23□□□□□ -1.73
CiitaP79621 Gm18944-201ENSMUST00000207672 643 ntBASIC4.23□□□□□ -1.73
CiitaP79621 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.23□□□□□ -1.73
CiitaP79621 AL929285.1-201ENSMUST00000215522 229 ntBASIC4.23□□□□□ -1.73
CiitaP79621 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.23□□□□□ -1.73
CiitaP79621 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.23□□□□□ -1.73
CiitaP79621 AC162934.3-201ENSMUST00000223015 841 ntBASIC4.23□□□□□ -1.73
CiitaP79621 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.23□□□□□ -1.73
CiitaP79621 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CiitaP79621 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CiitaP79621 Gm23443-201ENSMUST00000082916 128 ntBASIC4.23□□□□□ -1.73
CiitaP79621 Gm26121-201ENSMUST00000083364 162 ntBASIC4.23□□□□□ -1.73
CiitaP79621 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CiitaP79621 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CiitaP79621 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CiitaP79621 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CiitaP79621 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CiitaP79621 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
CiitaP79621 Gm24792-201ENSMUST00000104286 128 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm23322-201ENSMUST00000104464 167 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm12982-201ENSMUST00000117408 190 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm15994-201ENSMUST00000118029 402 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm16017-201ENSMUST00000119834 208 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm2966-201ENSMUST00000166052 481 ntBASIC4.22□□□□□ -1.73
CiitaP79621 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CiitaP79621 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.22□□□□□ -1.73
CiitaP79621 Gm25817-201ENSMUST00000177758 121 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm24766-201ENSMUST00000179182 121 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm27189-201ENSMUST00000184119 190 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.22□□□□□ -1.73
CiitaP79621 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CiitaP79621 Gm29334-201ENSMUST00000190334 357 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm43491-201ENSMUST00000197133 784 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm43142-201ENSMUST00000198670 361 ntBASIC4.22□□□□□ -1.73
CiitaP79621 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CiitaP79621 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CiitaP79621 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.22□□□□□ -1.73
CiitaP79621 AC124569.1-201ENSMUST00000225932 101 ntBASIC4.22□□□□□ -1.73
CiitaP79621 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.22□□□□□ -1.73
CiitaP79621 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CiitaP79621 Gm26439-201ENSMUST00000082592 106 ntBASIC4.22□□□□□ -1.73
CiitaP79621 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CiitaP79621 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.22□□□□□ -1.73
CiitaP79621 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.22□□□□□ -1.73
CiitaP79621 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CiitaP79621 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CiitaP79621 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
CiitaP79621 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CiitaP79621 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.21□□□□□ -1.73
CiitaP79621 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CiitaP79621 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm26075-201ENSMUST00000104062 121 ntBASIC4.21□□□□□ -1.74
CiitaP79621 Gm6584-201ENSMUST00000119671 447 ntBASIC4.21□□□□□ -1.74
CiitaP79621 Gm16458-201ENSMUST00000121428 502 ntBASIC4.21□□□□□ -1.74
CiitaP79621 Gm25292-201ENSMUST00000122797 322 ntBASIC4.21□□□□□ -1.74
CiitaP79621 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC4.21□□□□□ -1.74
CiitaP79621 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm18727-201ENSMUST00000185981 553 ntBASIC4.21□□□□□ -1.74
CiitaP79621 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.21□□□□□ -1.74
CiitaP79621 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CiitaP79621 Gm5317-201ENSMUST00000204445 847 ntBASIC4.21□□□□□ -1.74
CiitaP79621 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.21□□□□□ -1.74
CiitaP79621 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CiitaP79621 AC154552.4-201ENSMUST00000222171 151 ntBASIC4.21□□□□□ -1.74
CiitaP79621 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 121 ms