Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ercc3P49135 AC153529.1-201ENSMUST00000217818 370 ntBASIC4.84□□□□□ -1.63
Ercc3P49135 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.84□□□□□ -1.63
Ercc3P49135 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ercc3P49135 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ercc3P49135 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ercc3P49135 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ercc3P49135 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.84□□□□□ -1.64
Ercc3P49135 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Ercc3P49135 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ercc3P49135 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ercc3P49135 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ercc3P49135 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ercc3P49135 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Ercc3P49135 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ercc3P49135 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC4.83□□□□□ -1.64
Ercc3P49135 Gm14932-201ENSMUST00000117112 453 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm12252-201ENSMUST00000119517 219 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm13743-201ENSMUST00000121486 724 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm16412-201ENSMUST00000121602 273 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm12103-201ENSMUST00000121892 362 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.83□□□□□ -1.64
Ercc3P49135 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ercc3P49135 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.83□□□□□ -1.64
Ercc3P49135 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ercc3P49135 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.83□□□□□ -1.64
Ercc3P49135 Gm10177-202ENSMUST00000161698 207 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm17154-201ENSMUST00000165748 431 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Mir6996-201ENSMUST00000183922 61 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.83□□□□□ -1.64
Ercc3P49135 Gm28655-201ENSMUST00000191538 692 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm30280-201ENSMUST00000192214 262 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm37111-201ENSMUST00000193250 634 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm18944-201ENSMUST00000207672 643 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Gm45530-201ENSMUST00000211658 225 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ercc3P49135 Gm18016-201ENSMUST00000216119 801 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ercc3P49135 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.83□□□□□ -1.64
Ercc3P49135 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ercc3P49135 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ercc3P49135 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ercc3P49135 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ercc3P49135 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ercc3P49135 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ercc3P49135 Gm16431-201ENSMUST00000117454 431 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm12509-201ENSMUST00000118033 609 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm11718-201ENSMUST00000119942 537 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm11835-201ENSMUST00000120635 663 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm6591-201ENSMUST00000121063 434 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm13973-201ENSMUST00000121371 894 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm12226-201ENSMUST00000144172 876 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ercc3P49135 Gm25224-201ENSMUST00000158195 68 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm26219-201ENSMUST00000175216 71 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.82□□□□□ -1.64
Ercc3P49135 Gm27190-201ENSMUST00000184890 542 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm27760-201ENSMUST00000185048 114 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.82□□□□□ -1.64
Ercc3P49135 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.82□□□□□ -1.64
Ercc3P49135 Gm5368-201ENSMUST00000189012 589 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.82□□□□□ -1.64
Ercc3P49135 Gm38053-201ENSMUST00000193938 160 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm7449-201ENSMUST00000194393 663 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Mir7682-201ENSMUST00000198467 58 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm17887-201ENSMUST00000200194 547 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm34701-202ENSMUST00000204685 360 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm45031-201ENSMUST00000206800 288 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm44583-201ENSMUST00000207478 281 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm45523-201ENSMUST00000210712 799 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 AC091260.1-201ENSMUST00000216112 229 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Gm29774-201ENSMUST00000219270 436 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.82□□□□□ -1.64
Ercc3P49135 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 AC168062.2-201ENSMUST00000228907 422 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ercc3P49135 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ercc3P49135 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ercc3P49135 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ercc3P49135 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ercc3P49135 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Ercc3P49135 Gm25800-201ENSMUST00000082636 134 ntBASIC4.82□□□□□ -1.64
Ercc3P49135 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ercc3P49135 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ercc3P49135 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ercc3P49135 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm22269-201ENSMUST00000104002 130 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms