Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Rfx1P48377 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.95□□□□□ -1.46
Rfx1P48377 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Rfx1P48377 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.95□□□□□ -1.46
Rfx1P48377 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rfx1P48377 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rfx1P48377 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Rfx1P48377 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rfx1P48377 Gm4855-201ENSMUST00000192270 1967 ntBASIC5.95□□□□□ -1.46
Rfx1P48377 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Rfx1P48377 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Rfx1P48377 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Rfx1P48377 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Rfx1P48377 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Rfx1P48377 Gm14909-201ENSMUST00000117853 351 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Gm13711-201ENSMUST00000119708 453 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Gm22958-201ENSMUST00000122512 184 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.94□□□□□ -1.46
Rfx1P48377 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5.94□□□□□ -1.46
Rfx1P48377 Gm25363-201ENSMUST00000158850 245 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Rfx1P48377 Gm20543-201ENSMUST00000174200 726 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Rfx1P48377 Mir6539-201ENSMUST00000183732 110 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Gm18505-201ENSMUST00000187360 790 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Gm43723-201ENSMUST00000196886 189 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Gm42428-201ENSMUST00000198677 302 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.94□□□□□ -1.46
Rfx1P48377 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.94□□□□□ -1.46
Rfx1P48377 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Rfx1P48377 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Rfx1P48377 Gm23456-201ENSMUST00000083335 137 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Rfx1P48377 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.94□□□□□ -1.46
Rfx1P48377 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.94□□□□□ -1.46
Rfx1P48377 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm42536-201ENSMUST00000197562 1613 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
Rfx1P48377 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Rfx1P48377 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Rfx1P48377 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Rfx1P48377 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm11556-201ENSMUST00000120751 288 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm8061-201ENSMUST00000122380 350 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.93□□□□□ -1.46
Rfx1P48377 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.93□□□□□ -1.46
Rfx1P48377 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.93□□□□□ -1.46
Rfx1P48377 Gm25152-201ENSMUST00000157117 114 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm24719-201ENSMUST00000157520 110 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm3191-201ENSMUST00000167139 346 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.93□□□□□ -1.46
Rfx1P48377 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC5.93□□□□□ -1.46
Rfx1P48377 Mir7008-201ENSMUST00000184398 63 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Mir7087-201ENSMUST00000184840 70 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm28163-201ENSMUST00000187099 325 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm37455-201ENSMUST00000191993 529 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm9442-201ENSMUST00000194242 319 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC5.93□□□□□ -1.46
Rfx1P48377 Gm45614-201ENSMUST00000209994 721 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Gm17990-201ENSMUST00000211728 553 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Mir331-201ENSMUST00000083673 96 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Rfx1P48377 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.93□□□□□ -1.46
Rfx1P48377 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.93□□□□□ -1.46
Rfx1P48377 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Rfx1P48377 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.93□□□□□ -1.46
Rfx1P48377 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Rfx1P48377 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Rfx1P48377 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Rfx1P48377 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Rfx1P48377 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.92□□□□□ -1.46
Rfx1P48377 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Rfx1P48377 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Rfx1P48377 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Rfx1P48377 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Rfx1P48377 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Rfx1P48377 Gm22021-201ENSMUST00000104353 107 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Rfx1P48377 Gm12806-201ENSMUST00000119384 268 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm14765-201ENSMUST00000121954 326 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms