Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cxcl12P40224 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.47□□□□□ -1.85
Cxcl12P40224 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.47□□□□□ -1.85
Cxcl12P40224 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.47□□□□□ -1.85
Cxcl12P40224 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cxcl12P40224 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Cxcl12P40224 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Cxcl12P40224 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
Cxcl12P40224 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.46□□□□□ -1.85
Cxcl12P40224 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Cxcl12P40224 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.46□□□□□ -1.86
Cxcl12P40224 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.46□□□□□ -1.86
Cxcl12P40224 AC113059.2-201ENSMUST00000213462 3016 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Cxcl12P40224 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm15933-201ENSMUST00000117215 616 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm8475-201ENSMUST00000118211 526 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm13167-201ENSMUST00000118554 578 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm23591-201ENSMUST00000157663 286 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm26187-201ENSMUST00000157693 101 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm15508-201ENSMUST00000160330 325 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm8600-201ENSMUST00000186320 905 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm20162-201ENSMUST00000193629 871 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm18843-201ENSMUST00000194982 719 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm43355-201ENSMUST00000196541 346 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Mir142-201ENSMUST00000198092 64 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm45474-201ENSMUST00000209471 408 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm35405-201ENSMUST00000218754 400 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.46□□□□□ -1.86
Cxcl12P40224 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 AC107369.1-201ENSMUST00000227373 860 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cxcl12P40224 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm6361-201ENSMUST00000091031 435 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cxcl12P40224 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cxcl12P40224 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.46□□□□□ -1.86
Cxcl12P40224 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cxcl12P40224 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.46□□□□□ -1.86
Cxcl12P40224 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cxcl12P40224 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Cxcl12P40224 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Cxcl12P40224 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cxcl12P40224 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cxcl12P40224 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 Gm15212-201ENSMUST00000122403 466 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 Gm26477-201ENSMUST00000122617 323 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Cxcl12P40224 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 Mir3473c-201ENSMUST00000175262 81 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 Gm28263-201ENSMUST00000185884 400 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 Gm29218-205ENSMUST00000190846 615 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 Gm19761-201ENSMUST00000205372 391 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.45□□□□□ -1.86
Cxcl12P40224 Gm19269-201ENSMUST00000211401 804 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.45□□□□□ -1.86
Cxcl12P40224 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 AC134254.4-201ENSMUST00000223086 370 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.45□□□□□ -1.86
Cxcl12P40224 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cxcl12P40224 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cxcl12P40224 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cxcl12P40224 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cxcl12P40224 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm5392-201ENSMUST00000122189 789 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm26000-201ENSMUST00000157991 107 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm28339-201ENSMUST00000185845 696 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm6510-201ENSMUST00000195916 574 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.44□□□□□ -1.86
Cxcl12P40224 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm18672-201ENSMUST00000208035 270 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm45247-201ENSMUST00000210757 309 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm25810-201ENSMUST00000082752 108 ntBASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cxcl12P40224 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cxcl12P40224 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
Cxcl12P40224 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms