Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm25699-201ENSMUST00000082896 167 ntBASIC4.45□□□□□ -1.7
Traf1P39428 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.45□□□□□ -1.7
Traf1P39428 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Traf1P39428 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Traf1P39428 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Traf1P39428 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.45□□□□□ -1.7
Traf1P39428 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Traf1P39428 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Traf1P39428 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Traf1P39428 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Traf1P39428 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.44□□□□□ -1.7
Traf1P39428 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
Traf1P39428 Gm25765-201ENSMUST00000104100 132 ntBASIC4.44□□□□□ -1.7
Traf1P39428 Gm13607-201ENSMUST00000117875 539 ntBASIC4.44□□□□□ -1.7
Traf1P39428 Gm12881-201ENSMUST00000121191 203 ntBASIC4.44□□□□□ -1.7
Traf1P39428 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.44□□□□□ -1.7
Traf1P39428 Gm22219-201ENSMUST00000157562 319 ntBASIC4.44□□□□□ -1.7
Traf1P39428 Gm24811-201ENSMUST00000175313 100 ntBASIC4.44□□□□□ -1.7
Traf1P39428 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.44□□□□□ -1.7
Traf1P39428 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.44□□□□□ -1.7
Traf1P39428 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.44□□□□□ -1.7
Traf1P39428 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.44□□□□□ -1.7
Traf1P39428 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.44□□□□□ -1.7
Traf1P39428 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC4.44□□□□□ -1.7
Traf1P39428 Gm7380-201ENSMUST00000211599 466 ntBASIC4.44□□□□□ -1.7
Traf1P39428 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC4.44□□□□□ -1.7
Traf1P39428 Gm8231-201ENSMUST00000221617 783 ntBASIC4.44□□□□□ -1.7
Traf1P39428 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Traf1P39428 AC154424.1-201ENSMUST00000225883 799 ntBASIC4.44□□□□□ -1.7
Traf1P39428 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Traf1P39428 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Traf1P39428 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Traf1P39428 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Traf1P39428 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.44□□□□□ -1.7
Traf1P39428 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Traf1P39428 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Traf1P39428 AC154552.6-201ENSMUST00000221365 1342 ntBASIC4.44□□□□□ -1.7
Traf1P39428 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Traf1P39428 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm12106-201ENSMUST00000116006 1200 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm12982-201ENSMUST00000117408 190 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm11600-201ENSMUST00000119592 240 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm12691-201ENSMUST00000120186 456 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm14939-201ENSMUST00000120347 680 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm15116-201ENSMUST00000122248 663 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm24550-201ENSMUST00000158648 279 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Traf1P39428 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.43□□□□□ -1.7
Traf1P39428 Gm26556-201ENSMUST00000180645 320 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Traf1P39428 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm44475-201ENSMUST00000204041 424 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.43□□□□□ -1.7
Traf1P39428 Gm20039-201ENSMUST00000210329 394 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Traf1P39428 Gm45735-201ENSMUST00000212779 319 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Traf1P39428 Gm16419-201ENSMUST00000221057 625 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gm7119-201ENSMUST00000221345 695 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
Traf1P39428 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.43□□□□□ -1.7
Traf1P39428 AC118006.2-201ENSMUST00000224167 962 ntBASIC4.43□□□□□ -1.7
Traf1P39428 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.43□□□□□ -1.7
Traf1P39428 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Traf1P39428 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Traf1P39428 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Traf1P39428 Gm26121-201ENSMUST00000083364 162 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Traf1P39428 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Traf1P39428 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Traf1P39428 Gm27013-202ENSMUST00000205067 1436 ntBASIC4.43□□□□□ -1.7
Traf1P39428 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.43□□□□□ -1.7
Traf1P39428 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Traf1P39428 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Traf1P39428 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Traf1P39428 Gm23256-201ENSMUST00000102235 110 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Gm26140-201ENSMUST00000103807 110 ntBASIC4.42□□□□□ -1.7
Traf1P39428 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Gm14816-201ENSMUST00000117174 294 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Gm11372-201ENSMUST00000117348 570 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Gm15783-201ENSMUST00000117521 633 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Gm12900-201ENSMUST00000120919 573 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.42□□□□□ -1.7
Traf1P39428 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Traf1P39428 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.42□□□□□ -1.7
Traf1P39428 Gm24537-201ENSMUST00000157950 102 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Gm22908-201ENSMUST00000177620 110 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC4.42□□□□□ -1.7
Traf1P39428 Gm28920-201ENSMUST00000189957 699 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.42□□□□□ -1.7
Traf1P39428 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.42□□□□□ -1.7
Traf1P39428 Gm44348-201ENSMUST00000200165 122 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Traf1P39428 Gm19233-201ENSMUST00000219772 936 ntBASIC4.42□□□□□ -1.7
Traf1P39428 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.42□□□□□ -1.7
Traf1P39428 Gm4036-201ENSMUST00000220842 626 ntBASIC4.42□□□□□ -1.7
Traf1P39428 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 145.3 ms