Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.56□□□□□ -1.52
RaraP11416 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Gm43214-201ENSMUST00000199242 352 ntBASIC5.56□□□□□ -1.52
RaraP11416 Gm4734-201ENSMUST00000200117 777 ntBASIC5.56□□□□□ -1.52
RaraP11416 Mir7227-201ENSMUST00000200408 59 ntBASIC5.56□□□□□ -1.52
RaraP11416 Gm44523-201ENSMUST00000205616 417 ntBASIC5.56□□□□□ -1.52
RaraP11416 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC5.56□□□□□ -1.52
RaraP11416 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.56□□□□□ -1.52
RaraP11416 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RaraP11416 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.56□□□□□ -1.52
RaraP11416 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.56□□□□□ -1.52
RaraP11416 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RaraP11416 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.56□□□□□ -1.52
RaraP11416 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RaraP11416 Gm25937-201ENSMUST00000083912 107 ntBASIC5.56□□□□□ -1.52
RaraP11416 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.56□□□□□ -1.52
RaraP11416 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RaraP11416 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RaraP11416 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.56□□□□□ -1.52
RaraP11416 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RaraP11416 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RaraP11416 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.55□□□□□ -1.52
RaraP11416 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RaraP11416 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RaraP11416 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RaraP11416 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RaraP11416 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.55□□□□□ -1.52
RaraP11416 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.55□□□□□ -1.52
RaraP11416 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RaraP11416 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RaraP11416 Gm11781-201ENSMUST00000118328 472 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm15428-201ENSMUST00000121352 333 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RaraP11416 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.55□□□□□ -1.52
RaraP11416 Mir1970-201ENSMUST00000157839 104 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm26404-201ENSMUST00000158498 109 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RaraP11416 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.55□□□□□ -1.52
RaraP11416 Mir6539-201ENSMUST00000183732 110 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm27818-201ENSMUST00000184536 159 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.55□□□□□ -1.52
RaraP11416 Gm9443-201ENSMUST00000188406 816 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm28654-201ENSMUST00000189801 379 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm19193-201ENSMUST00000190263 590 ntBASIC5.55□□□□□ -1.52
RaraP11416 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RaraP11416 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RaraP11416 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.55□□□□□ -1.52
RaraP11416 Gm10048-201ENSMUST00000194196 372 ntBASIC5.55□□□□□ -1.52
RaraP11416 Igkv2-105-201ENSMUST00000196931 377 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm42566-201ENSMUST00000197120 643 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.55□□□□□ -1.52
RaraP11416 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.55□□□□□ -1.52
RaraP11416 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.55□□□□□ -1.52
RaraP11416 LOC665443-201ENSMUST00000212284 796 ntBASIC5.55□□□□□ -1.52
RaraP11416 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.55□□□□□ -1.52
RaraP11416 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.55□□□□□ -1.52
RaraP11416 AC163033.1-201ENSMUST00000218608 157 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.55□□□□□ -1.52
RaraP11416 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RaraP11416 CT010454.1-201ENSMUST00000225975 265 ntBASIC5.55□□□□□ -1.52
RaraP11416 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm26330-201ENSMUST00000082817 104 ntBASIC5.55□□□□□ -1.52
RaraP11416 Gm25260-201ENSMUST00000083053 134 ntBASIC5.55□□□□□ -1.52
RaraP11416 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RaraP11416 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.55□□□□□ -1.52
RaraP11416 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.55□□□□□ -1.52
RaraP11416 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RaraP11416 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RaraP11416 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.55□□□□□ -1.52
RaraP11416 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RaraP11416 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RaraP11416 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RaraP11416 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RaraP11416 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.54□□□□□ -1.52
RaraP11416 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RaraP11416 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RaraP11416 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm6134-201ENSMUST00000117265 171 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm12683-201ENSMUST00000117528 415 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm16089-201ENSMUST00000117679 336 ntBASIC5.54□□□□□ -1.52
RaraP11416 Gm17014-201ENSMUST00000120765 168 ntBASIC5.54□□□□□ -1.52
RaraP11416 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms