Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Gm26367-201ENSMUST00000104165 132 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Gm12492-201ENSMUST00000117665 564 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Gm12571-201ENSMUST00000118132 243 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Gm14303-201ENSMUST00000121320 171 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.95□□□□□ -1.78
Lire1P11260 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Lire1P11260 Gm23716-201ENSMUST00000157348 144 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Gm25386-201ENSMUST00000157814 288 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Gm27457-201ENSMUST00000184771 156 ntBASIC3.95□□□□□ -1.78
Lire1P11260 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Lire1P11260 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Lire1P11260 Gm37576-201ENSMUST00000194228 372 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.95□□□□□ -1.78
Lire1P11260 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Lire1P11260 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.95□□□□□ -1.78
Lire1P11260 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.95□□□□□ -1.78
Lire1P11260 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Lire1P11260 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Lire1P11260 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Lire1P11260 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Lire1P11260 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Lire1P11260 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Lire1P11260 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Lire1P11260 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.95□□□□□ -1.78
Lire1P11260 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Lire1P11260 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lire1P11260 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Lire1P11260 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Lire1P11260 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Lire1P11260 Gm14677-201ENSMUST00000117866 486 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm11252-201ENSMUST00000120572 939 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm11506-201ENSMUST00000122414 470 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm22204-201ENSMUST00000122654 327 ntBASIC3.94□□□□□ -1.78
Lire1P11260 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lire1P11260 Gm24739-201ENSMUST00000158855 292 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Mir5134-201ENSMUST00000175529 78 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.94□□□□□ -1.78
Lire1P11260 Gm5974-201ENSMUST00000181607 986 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lire1P11260 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lire1P11260 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.94□□□□□ -1.78
Lire1P11260 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.94□□□□□ -1.78
Lire1P11260 Gm7449-201ENSMUST00000194393 663 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lire1P11260 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm37095-201ENSMUST00000195421 205 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.94□□□□□ -1.78
Lire1P11260 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.94□□□□□ -1.78
Lire1P11260 Gm43710-201ENSMUST00000199583 452 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm4045-201ENSMUST00000204076 310 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.94□□□□□ -1.78
Lire1P11260 Gm8209-201ENSMUST00000206386 553 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm45192-201ENSMUST00000206749 283 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm18598-201ENSMUST00000207724 597 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lire1P11260 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.94□□□□□ -1.78
Lire1P11260 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.94□□□□□ -1.78
Lire1P11260 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.94□□□□□ -1.78
Lire1P11260 Gm9616-201ENSMUST00000221154 781 ntBASIC3.94□□□□□ -1.78
Lire1P11260 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.94□□□□□ -1.78
Lire1P11260 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Lire1P11260 Gm25799-201ENSMUST00000082643 107 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Mir383-201ENSMUST00000083523 70 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Lire1P11260 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.94□□□□□ -1.78
Lire1P11260 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Lire1P11260 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Lire1P11260 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Lire1P11260 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.93□□□□□ -1.78
Lire1P11260 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Lire1P11260 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Lire1P11260 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Lire1P11260 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Lire1P11260 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Lire1P11260 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.93□□□□□ -1.78
Lire1P11260 Gm13501-201ENSMUST00000118477 979 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm15193-201ENSMUST00000120224 865 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Lire1P11260 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.93□□□□□ -1.78
Lire1P11260 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.93□□□□□ -1.78
Lire1P11260 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Lire1P11260 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm13249-201ENSMUST00000177803 345 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Lire1P11260 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Lire1P11260 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Lire1P11260 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Lire1P11260 Gm26701-201ENSMUST00000181571 234 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm28304-201ENSMUST00000185977 312 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm29256-201ENSMUST00000189094 312 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm28484-201ENSMUST00000190606 312 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms