Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
Hoxd3P09027 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hoxd3P09027 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.66□□□□□ -1.66
Hoxd3P09027 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.66□□□□□ -1.66
Hoxd3P09027 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Hoxd3P09027 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Hoxd3P09027 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Hoxd3P09027 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Hoxd3P09027 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Hoxd3P09027 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Hoxd3P09027 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Hoxd3P09027 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Hoxd3P09027 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Hoxd3P09027 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Hoxd3P09027 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Hoxd3P09027 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.65□□□□□ -1.66
Hoxd3P09027 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm24423-201ENSMUST00000101982 106 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm13641-201ENSMUST00000117993 473 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm15037-201ENSMUST00000120358 259 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm25720-201ENSMUST00000157503 105 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm22932-201ENSMUST00000175510 72 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm37732-201ENSMUST00000194377 316 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.65□□□□□ -1.67
Hoxd3P09027 AC134254.2-201ENSMUST00000221262 170 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 AC124709.3-201ENSMUST00000227294 171 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm5229-201ENSMUST00000039375 354 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm26204-201ENSMUST00000082906 107 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Mir298-201ENSMUST00000083476 82 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm43503-201ENSMUST00000200033 3408 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hoxd3P09027 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Hoxd3P09027 AC160028.2-201ENSMUST00000218937 2519 ntBASIC4.65□□□□□ -1.67
Hoxd3P09027 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Hoxd3P09027 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm43745-201ENSMUST00000198085 1883 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 AC164297.2-201ENSMUST00000224388 1508 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm24121-201ENSMUST00000102029 106 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm23211-201ENSMUST00000122717 308 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm23537-201ENSMUST00000157536 330 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm25664-201ENSMUST00000157697 107 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm28020-201ENSMUST00000157739 67 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm23225-201ENSMUST00000158121 114 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm22537-201ENSMUST00000158172 199 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms