Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col3a1P08121 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col3a1P08121 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Mir711-201ENSMUST00000102188 82 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col3a1P08121 Gm15180-201ENSMUST00000117745 492 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm11854-201ENSMUST00000117839 446 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm5762-201ENSMUST00000119204 258 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm4910-201ENSMUST00000119605 366 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm11357-201ENSMUST00000119758 954 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm11830-201ENSMUST00000120175 561 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm13532-201ENSMUST00000120373 240 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Mup-ps13-201ENSMUST00000120662 545 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Mup-ps1-201ENSMUST00000120720 544 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Mup-ps22-201ENSMUST00000121611 243 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.29□□□□□ -1.72
Col3a1P08121 Gm23387-201ENSMUST00000158586 107 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm23385-201ENSMUST00000158592 295 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm7281-201ENSMUST00000160010 543 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col3a1P08121 Gm24754-201ENSMUST00000177997 107 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm29064-201ENSMUST00000187014 813 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC4.29□□□□□ -1.72
Col3a1P08121 Gm28927-201ENSMUST00000191528 272 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm43487-201ENSMUST00000200331 1031 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 AL935138.1-201ENSMUST00000215309 196 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm34005-201ENSMUST00000215834 282 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Gm8785-201ENSMUST00000220259 487 ntBASIC4.29□□□□□ -1.72
Col3a1P08121 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col3a1P08121 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col3a1P08121 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col3a1P08121 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col3a1P08121 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Col3a1P08121 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col3a1P08121 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col3a1P08121 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col3a1P08121 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm26145-201ENSMUST00000104476 127 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col3a1P08121 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col3a1P08121 Mir669d-2-201ENSMUST00000116854 86 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm15176-201ENSMUST00000117734 135 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm5943-201ENSMUST00000119458 459 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm25432-201ENSMUST00000158284 66 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col3a1P08121 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC4.28□□□□□ -1.72
Col3a1P08121 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm28118-201ENSMUST00000185957 294 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm28614-201ENSMUST00000186483 458 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm6510-201ENSMUST00000195916 574 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm5317-201ENSMUST00000204445 847 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm44927-201ENSMUST00000207573 716 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Col3a1P08121 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col3a1P08121 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 AC158981.3-202ENSMUST00000228906 523 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm9765-201ENSMUST00000043170 321 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col3a1P08121 mt-Td-201ENSMUST00000082404 70 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col3a1P08121 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.28□□□□□ -1.72
Col3a1P08121 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.28□□□□□ -1.72
Col3a1P08121 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col3a1P08121 Gm43466-201ENSMUST00000197836 5214 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col3a1P08121 Gm23747-201ENSMUST00000104228 131 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Gm14825-201ENSMUST00000113538 701 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Gm13155-201ENSMUST00000119277 646 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Gm14534-201ENSMUST00000120045 357 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Gm14989-201ENSMUST00000120497 207 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Gm8178-201ENSMUST00000121570 646 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC4.27□□□□□ -1.73
Col3a1P08121 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.27□□□□□ -1.73
Col3a1P08121 Gm23467-201ENSMUST00000157127 159 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
Col3a1P08121 Ear-ps10-201ENSMUST00000161871 460 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Gm26194-201ENSMUST00000175036 71 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Gm18415-201ENSMUST00000177464 647 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col3a1P08121 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.27□□□□□ -1.73
Col3a1P08121 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col3a1P08121 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col3a1P08121 Gm45860-201ENSMUST00000212700 334 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 AC112972.1-201ENSMUST00000227329 365 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 CT030662.1-201ENSMUST00000227380 232 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 AC144628.1-201ENSMUST00000227943 466 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Col3a1P08121 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col3a1P08121 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC4.27□□□□□ -1.73
Col3a1P08121 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms