Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cbx4O55187 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cbx4O55187 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Cbx4O55187 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cbx4O55187 Gm11845-201ENSMUST00000117886 327 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm7429-201ENSMUST00000118664 348 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm14887-201ENSMUST00000119522 663 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm12190-201ENSMUST00000120001 187 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm12884-201ENSMUST00000120371 325 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm12045-201ENSMUST00000122122 573 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm15038-201ENSMUST00000122144 296 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm22514-201ENSMUST00000122547 308 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cbx4O55187 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cbx4O55187 Gm25908-201ENSMUST00000157624 98 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm22314-201ENSMUST00000158007 281 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm22135-201ENSMUST00000158752 108 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm17054-201ENSMUST00000169811 259 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Cbx4O55187 Mir7074-201ENSMUST00000183884 63 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm27190-201ENSMUST00000184890 542 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm29610-201ENSMUST00000187749 453 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cbx4O55187 Gm37727-201ENSMUST00000191637 819 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm35702-201ENSMUST00000198653 511 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm44118-201ENSMUST00000204665 229 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Gm45367-201ENSMUST00000210171 347 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Cbx4O55187 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.08□□□□□ -1.76
Cbx4O55187 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.08□□□□□ -1.76
Cbx4O55187 AC123062.1-201ENSMUST00000221287 481 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 CT025603.4-201ENSMUST00000225777 413 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 AC170810.3-201ENSMUST00000226177 374 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Cbx4O55187 AC166344.2-201ENSMUST00000226747 374 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cbx4O55187 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Cbx4O55187 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Cbx4O55187 Mir27a-201ENSMUST00000083510 87 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.08□□□□□ -1.76
Cbx4O55187 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Cbx4O55187 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cbx4O55187 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cbx4O55187 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cbx4O55187 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cbx4O55187 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cbx4O55187 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm11404-201ENSMUST00000120872 494 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm14982-201ENSMUST00000121102 442 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm11260-201ENSMUST00000121163 942 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm22453-201ENSMUST00000122801 318 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.07□□□□□ -1.76
Cbx4O55187 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cbx4O55187 Gm17030-201ENSMUST00000167016 393 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
Cbx4O55187 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cbx4O55187 Gm23379-201ENSMUST00000180026 107 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm11392-201ENSMUST00000181419 710 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Mir6414-201ENSMUST00000183685 82 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Mir6899-201ENSMUST00000184798 64 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm17929-201ENSMUST00000186851 627 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.07□□□□□ -1.76
Cbx4O55187 Gm28615-201ENSMUST00000187527 482 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.07□□□□□ -1.76
Cbx4O55187 Gm28597-201ENSMUST00000187664 666 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
Cbx4O55187 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cbx4O55187 Gm38008-201ENSMUST00000195333 518 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.07□□□□□ -1.76
Cbx4O55187 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cbx4O55187 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC4.07□□□□□ -1.76
Cbx4O55187 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cbx4O55187 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.07□□□□□ -1.76
Cbx4O55187 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cbx4O55187 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.07□□□□□ -1.76
Cbx4O55187 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cbx4O55187 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cbx4O55187 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cbx4O55187 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.07□□□□□ -1.76
Cbx4O55187 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cbx4O55187 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cbx4O55187 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cbx4O55187 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Cbx4O55187 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.06□□□□□ -1.76
Cbx4O55187 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Cbx4O55187 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.06□□□□□ -1.76
Cbx4O55187 Gm25537-201ENSMUST00000103851 109 ntBASIC4.06□□□□□ -1.76
Cbx4O55187 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 212.1 ms