Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm23084-201ENSMUST00000157850 114 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm3123-201ENSMUST00000163480 480 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm25534-201ENSMUST00000175365 125 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Hmgb3O54879 Mir6960-201ENSMUST00000183449 61 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm29064-201ENSMUST00000187014 813 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm28785-201ENSMUST00000187478 379 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm20203-201ENSMUST00000192352 332 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm20162-201ENSMUST00000193629 871 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm18660-201ENSMUST00000199542 629 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm44425-201ENSMUST00000203739 429 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm19244-201ENSMUST00000204340 253 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm43954-201ENSMUST00000204634 544 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm44266-201ENSMUST00000205235 500 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm4501-201ENSMUST00000207330 551 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm4528-201ENSMUST00000207905 551 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm44690-201ENSMUST00000207984 382 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm8748-201ENSMUST00000211125 587 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 AC153971.2-201ENSMUST00000214553 777 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Hmgb3O54879 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC2.62□□□□□ -1.99
Hmgb3O54879 AC154305.1-201ENSMUST00000224443 450 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Hmgb3O54879 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Hmgb3O54879 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm25480-201ENSMUST00000083217 133 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Hmgb3O54879 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm10356-201ENSMUST00000097152 1258 ntBASIC2.62□□□□□ -1.99
Hmgb3O54879 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Hmgb3O54879 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Hmgb3O54879 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Hmgb3O54879 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Hmgb3O54879 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Hmgb3O54879 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Hmgb3O54879 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Hmgb3O54879 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Hmgb3O54879 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm24273-201ENSMUST00000102332 164 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Hmgb3O54879 Defa-ps9-201ENSMUST00000118264 276 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm14975-201ENSMUST00000118741 664 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm23098-201ENSMUST00000157552 299 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm22961-201ENSMUST00000157964 106 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm23666-201ENSMUST00000158053 116 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm23773-201ENSMUST00000158985 296 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
Hmgb3O54879 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC2.61□□□□□ -1.99
Hmgb3O54879 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm21756-201ENSMUST00000178380 930 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm22910-201ENSMUST00000178568 132 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm21405-201ENSMUST00000179024 930 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm21241-201ENSMUST00000179551 934 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm27611-201ENSMUST00000184690 108 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm21191-201ENSMUST00000186484 930 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm29408-201ENSMUST00000187536 216 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm29503-201ENSMUST00000191044 930 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm20819-201ENSMUST00000191091 925 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm20871-201ENSMUST00000191322 931 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm6510-201ENSMUST00000195916 574 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm43115-201ENSMUST00000196244 160 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm43559-201ENSMUST00000198755 466 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm5885-202ENSMUST00000203357 528 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm45105-201ENSMUST00000207824 397 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Gm12582-201ENSMUST00000030555 697 ntBASIC2.61□□□□□ -1.99
Hmgb3O54879 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
Hmgb3O54879 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms