Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Scn3aA2ASI5 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Scn3aA2ASI5 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm24561-201ENSMUST00000175182 95 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm29320-201ENSMUST00000185235 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm29179-202ENSMUST00000186138 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm28598-201ENSMUST00000186490 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm29448-201ENSMUST00000186675 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm29314-201ENSMUST00000186800 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm28253-202ENSMUST00000187971 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm29268-201ENSMUST00000188669 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm29169-201ENSMUST00000189835 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm29218-205ENSMUST00000190846 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm28978-201ENSMUST00000191120 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm37172-201ENSMUST00000191926 615 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm20946-201ENSMUST00000212367 461 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Snord21-201ENSMUST00000082519 94 ntBASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Scn3aA2ASI5 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Scn3aA2ASI5 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Gm12090-201ENSMUST00000118692 758 ntBASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Gm12723-201ENSMUST00000120700 451 ntBASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Gm28282-201ENSMUST00000186072 186 ntBASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Gm44817-201ENSMUST00000205416 453 ntBASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Gm44972-201ENSMUST00000206419 406 ntBASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Scn3aA2ASI5 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Gm11673-201ENSMUST00000117846 331 ntBASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Gm26215-201ENSMUST00000158584 139 ntBASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Gm44521-201ENSMUST00000206469 217 ntBASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 AC154851.2-201ENSMUST00000222172 644 ntBASIC3.45□□□□□ -1.86
Scn3aA2ASI5 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Scn3aA2ASI5 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.45□□□□□ -1.86
Scn3aA2ASI5 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm23467-201ENSMUST00000157127 159 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm23958-201ENSMUST00000157207 105 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm17187-201ENSMUST00000164622 410 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm21112-201ENSMUST00000212224 578 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm7760-201ENSMUST00000212265 578 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm30534-201ENSMUST00000217928 207 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm3030-201ENSMUST00000163410 516 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Mir5123-201ENSMUST00000177794 83 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Mir6916-201ENSMUST00000184514 63 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm36382-201ENSMUST00000198892 541 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm45223-201ENSMUST00000207037 5138 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.44□□□□□ -1.86
Scn3aA2ASI5 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Scn3aA2ASI5 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Scn3aA2ASI5 Gm7853-201ENSMUST00000100708 478 ntBASIC3.43□□□□□ -1.86
Scn3aA2ASI5 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Scn3aA2ASI5 Gm26088-201ENSMUST00000157896 131 ntBASIC3.43□□□□□ -1.86
Scn3aA2ASI5 Gm21893-201ENSMUST00000179119 397 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms