Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm44157-201ENSMUST00000204720 410 ntBASIC3.24□□□□□ -1.89
Scn1aA2APX8 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.24□□□□□ -1.89
Scn1aA2APX8 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Scn1aA2APX8 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn1aA2APX8 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn1aA2APX8 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.24□□□□□ -1.89
Scn1aA2APX8 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1aA2APX8 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Scn1aA2APX8 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Scn1aA2APX8 Gm14885-201ENSMUST00000117969 496 ntBASIC3.23□□□□□ -1.89
Scn1aA2APX8 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1aA2APX8 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.23□□□□□ -1.89
Scn1aA2APX8 Gm44600-201ENSMUST00000208540 111 ntBASIC3.23□□□□□ -1.89
Scn1aA2APX8 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn1aA2APX8 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Scn1aA2APX8 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Scn1aA2APX8 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1aA2APX8 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Scn1aA2APX8 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Scn1aA2APX8 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.23□□□□□ -1.89
Scn1aA2APX8 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm12849-201ENSMUST00000120013 739 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm7071-201ENSMUST00000120458 462 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm18522-201ENSMUST00000173947 650 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Mir129-2-201ENSMUST00000083577 90 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm11598-201ENSMUST00000119257 357 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm27044-201ENSMUST00000183033 796 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm7870-201ENSMUST00000184467 616 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm37111-201ENSMUST00000193250 634 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm45400-201ENSMUST00000211603 653 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm4928-201ENSMUST00000219622 850 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn1aA2APX8 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Scn1aA2APX8 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.21□□□□□ -1.89
Scn1aA2APX8 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.21□□□□□ -1.89
Scn1aA2APX8 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.21□□□□□ -1.89
Scn1aA2APX8 Gm12090-201ENSMUST00000118692 758 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm22538-201ENSMUST00000158169 299 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Scn1aA2APX8 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm18445-201ENSMUST00000195502 774 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm44393-201ENSMUST00000197418 138 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.21□□□□□ -1.9
Scn1aA2APX8 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Scn1aA2APX8 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
Scn1aA2APX8 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Scn1aA2APX8 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.21□□□□□ -1.9
Scn1aA2APX8 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Scn1aA2APX8 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm26928-201ENSMUST00000182674 572 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm27315-201ENSMUST00000183977 154 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm7142-201ENSMUST00000194232 586 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm38356-201ENSMUST00000194313 408 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms