Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.2□□□□□ -1.9
Trav8n-2A0A075B633 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.2□□□□□ -1.9
Trav8n-2A0A075B633 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trav8n-2A0A075B633 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.2□□□□□ -1.9
Trav8n-2A0A075B633 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trav8n-2A0A075B633 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm15933-201ENSMUST00000117215 616 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm13443-201ENSMUST00000120770 555 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm7308-201ENSMUST00000121087 447 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm12578-201ENSMUST00000121244 417 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm26088-201ENSMUST00000157896 131 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm16563-201ENSMUST00000162673 423 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm9613-201ENSMUST00000171662 196 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Mir7k-201ENSMUST00000184115 110 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm29105-201ENSMUST00000187256 450 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm43932-201ENSMUST00000204499 52 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm44232-201ENSMUST00000204537 225 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm18672-201ENSMUST00000208035 270 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.19□□□□□ -1.9
Trav8n-2A0A075B633 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm12392-201ENSMUST00000118014 938 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm11843-201ENSMUST00000118984 425 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm14589-201ENSMUST00000121640 727 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm22988-201ENSMUST00000122759 144 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm26028-201ENSMUST00000158660 294 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm7094-201ENSMUST00000178379 366 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm37111-201ENSMUST00000193250 634 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm33973-201ENSMUST00000195148 534 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm20177-201ENSMUST00000203705 334 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm45031-201ENSMUST00000206800 288 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Gm8785-201ENSMUST00000220259 487 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Snord35b-201ENSMUST00000082833 87 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav8n-2A0A075B633 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Gm42968-201ENSMUST00000198578 1372 ntBASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Gm24715-201ENSMUST00000102377 95 ntBASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Gm25407-201ENSMUST00000104102 134 ntBASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Gm26387-201ENSMUST00000104238 132 ntBASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Gm5754-201ENSMUST00000118774 892 ntBASIC3.17□□□□□ -1.9
Trav8n-2A0A075B633 Gm13865-201ENSMUST00000120957 865 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms