Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Mir6391-201ENSMUST00000184391 104 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Gm37878-201ENSMUST00000192108 387 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Gm37836-201ENSMUST00000195875 175 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Gm44349-201ENSMUST00000197048 123 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Gm4644-201ENSMUST00000197587 400 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Gm44058-201ENSMUST00000204335 467 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 AC192616.3-201ENSMUST00000220797 1124 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 AC154484.1-201ENSMUST00000227311 771 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Gm21286-201ENSMUST00000098035 545 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Olfr713-201ENSMUST00000098139 975 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
H2afb1S4R1E0 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Snora64-201ENSMUST00000104521 134 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm13155-201ENSMUST00000119277 646 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm8178-201ENSMUST00000121570 646 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm7618-201ENSMUST00000121643 171 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm24965-201ENSMUST00000157922 106 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm25655-201ENSMUST00000158465 290 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm24739-201ENSMUST00000158855 292 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm17377-201ENSMUST00000165184 207 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm17085-201ENSMUST00000165425 502 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm20526-201ENSMUST00000173416 158 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Mir3062-201ENSMUST00000174986 105 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm25019-201ENSMUST00000179732 110 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Mir8118-201ENSMUST00000183962 129 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Mir6410-201ENSMUST00000184204 104 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm27817-201ENSMUST00000184302 233 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm28384-201ENSMUST00000189079 463 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm37866-201ENSMUST00000191950 696 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm17893-201ENSMUST00000203017 770 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm43975-201ENSMUST00000203023 481 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Gm22245-201ENSMUST00000082479 103 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Snora31-201ENSMUST00000083213 130 ntBASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
H2afb1S4R1E0 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
H2afb1S4R1E0 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
H2afb1S4R1E0 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
H2afb1S4R1E0 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.56□□□□□ -1.84
H2afb1S4R1E0 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
H2afb1S4R1E0 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
H2afb1S4R1E0 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
H2afb1S4R1E0 Gm24096-201ENSMUST00000103905 110 ntBASIC3.56□□□□□ -1.84
H2afb1S4R1E0 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms