Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm2892-201ENSMUST00000145537 711 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm10357-201ENSMUST00000159886 264 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm16290-201ENSMUST00000161175 474 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm8641-201ENSMUST00000186995 826 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm28155-201ENSMUST00000191066 151 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm37002-201ENSMUST00000194560 373 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm37290-201ENSMUST00000195775 339 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm42758-201ENSMUST00000202146 283 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm18598-201ENSMUST00000207724 597 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm6240-201ENSMUST00000208014 473 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm45553-201ENSMUST00000209929 507 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm17917-201ENSMUST00000218561 953 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm5175-202ENSMUST00000219699 529 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim3Q9R1R2 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.53□□□□□ -1.85
Trim3Q9R1R2 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
Trim3Q9R1R2 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm16100-201ENSMUST00000120489 231 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm15488-201ENSMUST00000121682 670 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm22107-201ENSMUST00000122548 100 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm24061-201ENSMUST00000157489 120 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm23112-201ENSMUST00000158606 125 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm6625-201ENSMUST00000177870 272 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm25944-201ENSMUST00000178758 94 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm27445-201ENSMUST00000184484 72 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm18505-201ENSMUST00000187360 790 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm37495-201ENSMUST00000194590 264 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm42438-201ENSMUST00000197832 974 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm31520-201ENSMUST00000203048 733 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm8249-201ENSMUST00000219225 465 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm8274-201ENSMUST00000219820 463 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim3Q9R1R2 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Mir690-201ENSMUST00000102110 109 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm25097-201ENSMUST00000104042 145 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm26418-201ENSMUST00000104275 137 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm15038-201ENSMUST00000122144 296 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm23782-201ENSMUST00000157939 120 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm25436-201ENSMUST00000158275 145 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm17164-201ENSMUST00000169013 506 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms