Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm24473-201ENSMUST00000104483 131 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm22372-201ENSMUST00000104589 136 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm13137-201ENSMUST00000118035 345 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm24916-201ENSMUST00000157287 79 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm25494-201ENSMUST00000158143 100 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm25445-201ENSMUST00000158996 299 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm28685-201ENSMUST00000187545 1101 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm37732-201ENSMUST00000194377 316 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm18540-201ENSMUST00000204025 526 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm44208-201ENSMUST00000205199 421 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm39197-201ENSMUST00000212069 457 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm45710-201ENSMUST00000212847 215 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Lhx6Q9R1R0 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm15314-201ENSMUST00000120740 1887 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm23910-201ENSMUST00000104597 132 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm11584-201ENSMUST00000120636 325 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm11894-201ENSMUST00000121579 328 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm14694-201ENSMUST00000121856 282 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm23902-201ENSMUST00000157571 134 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm23260-201ENSMUST00000158317 172 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Mir6417-201ENSMUST00000183815 116 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm29454-201ENSMUST00000190805 393 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm36935-201ENSMUST00000192526 292 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm45553-201ENSMUST00000209929 507 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 AC160984.2-201ENSMUST00000224927 791 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 AC168881.1-201ENSMUST00000226018 430 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm23517-201ENSMUST00000082830 192 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm26055-201ENSMUST00000083038 107 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Mir146-201ENSMUST00000083667 65 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lhx6Q9R1R0 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Mir687-201ENSMUST00000102166 89 ntBASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Rnu11-201ENSMUST00000104135 134 ntBASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Gm23440-201ENSMUST00000104299 130 ntBASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Gm25345-201ENSMUST00000104505 133 ntBASIC6.04□□□□□ -1.44
Lhx6Q9R1R0 Gm11561-201ENSMUST00000117429 417 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms