Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm23887-201ENSMUST00000122683 172 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm23123-201ENSMUST00000157648 144 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm24727-201ENSMUST00000158231 144 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm24976-201ENSMUST00000158972 135 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm18150-201ENSMUST00000195341 645 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm44088-201ENSMUST00000204595 237 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm43954-201ENSMUST00000204634 544 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm22826-201ENSMUST00000083774 165 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm23850-201ENSMUST00000083830 169 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trem1Q9JKE2 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm11566-201ENSMUST00000118550 203 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm15333-201ENSMUST00000118825 364 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm14688-201ENSMUST00000119169 303 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm7618-201ENSMUST00000121643 171 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm25271-201ENSMUST00000157273 290 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm24773-201ENSMUST00000158513 99 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm15838-201ENSMUST00000161575 180 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm20397-201ENSMUST00000174520 362 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Mir6914-201ENSMUST00000184999 69 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Npn2-202ENSMUST00000189275 235 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm20811-201ENSMUST00000190500 553 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm37428-201ENSMUST00000193886 137 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Gm35931-201ENSMUST00000203931 448 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trem1Q9JKE2 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm22370-201ENSMUST00000102422 83 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm26067-201ENSMUST00000103789 110 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm26273-201ENSMUST00000104180 131 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm15076-201ENSMUST00000117076 474 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm11575-201ENSMUST00000122243 228 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm24939-201ENSMUST00000158325 137 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm22111-201ENSMUST00000178010 79 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm23687-201ENSMUST00000178664 79 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm24566-201ENSMUST00000179286 79 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm23305-201ENSMUST00000179342 79 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm26389-201ENSMUST00000179819 79 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm22130-201ENSMUST00000179979 79 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm22393-201ENSMUST00000180153 79 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm25085-201ENSMUST00000180298 79 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm6113-201ENSMUST00000180319 639 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Mir6537-201ENSMUST00000184150 110 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm37300-201ENSMUST00000193327 280 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm18384-201ENSMUST00000195974 808 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm17937-201ENSMUST00000197908 742 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm44184-201ENSMUST00000204290 132 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm45651-201ENSMUST00000210857 335 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 Gm18120-201ENSMUST00000220079 511 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.28□□□□□ -1.88
Trem1Q9JKE2 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms