Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cpsf1Q9EPU4 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cpsf1Q9EPU4 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cpsf1Q9EPU4 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Gm15933-201ENSMUST00000117215 616 ntBASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Gm28282-201ENSMUST00000186072 186 ntBASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Gm28724-202ENSMUST00000194218 295 ntBASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Gm38334-201ENSMUST00000195060 313 ntBASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Gm44526-201ENSMUST00000204664 121 ntBASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Gm16419-201ENSMUST00000221057 625 ntBASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 AC166830.1-201ENSMUST00000224201 533 ntBASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Cpsf1Q9EPU4 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Gm26928-201ENSMUST00000182674 572 ntBASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Ighv1-41-201ENSMUST00000194414 329 ntBASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Gm43746-201ENSMUST00000200028 317 ntBASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Gm6064-201ENSMUST00000203999 454 ntBASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Gm21112-201ENSMUST00000212224 578 ntBASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Gm7760-201ENSMUST00000212265 578 ntBASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 AC124537.1-201ENSMUST00000222890 159 ntBASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cpsf1Q9EPU4 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Gm14788-201ENSMUST00000119457 375 ntBASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Gm37515-201ENSMUST00000193321 3817 ntBASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Gm33973-201ENSMUST00000195148 534 ntBASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Gm6841-201ENSMUST00000220602 598 ntBASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Snord21-201ENSMUST00000082519 94 ntBASIC4.24□□□□□ -1.73
Cpsf1Q9EPU4 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Gm7281-201ENSMUST00000160010 543 ntBASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Gm28628-201ENSMUST00000187006 264 ntBASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Gm28629-201ENSMUST00000187309 263 ntBASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cpsf1Q9EPU4 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Gm14463-201ENSMUST00000121117 498 ntBASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Gm44157-201ENSMUST00000204720 410 ntBASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 AC168266.1-201ENSMUST00000216024 226 ntBASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Gm5176-202ENSMUST00000220267 583 ntBASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cpsf1Q9EPU4 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Gm23424-201ENSMUST00000103889 110 ntBASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Gm8475-201ENSMUST00000118211 526 ntBASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Gm13009-201ENSMUST00000121307 267 ntBASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Gm26215-201ENSMUST00000158584 139 ntBASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Gm28534-201ENSMUST00000187744 676 ntBASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Gm42785-201ENSMUST00000202316 3835 ntBASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Cpsf1Q9EPU4 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Cpsf1Q9EPU4 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.21□□□□□ -1.74
Cpsf1Q9EPU4 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cpsf1Q9EPU4 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cpsf1Q9EPU4 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cpsf1Q9EPU4 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms