Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Mir450-2-201ENSMUST00000102444 69 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm26140-201ENSMUST00000103807 110 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm12564-201ENSMUST00000119860 321 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm24751-201ENSMUST00000157844 102 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm24314-201ENSMUST00000158274 123 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm42830-201ENSMUST00000196642 313 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm45171-201ENSMUST00000206360 736 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 AC154426.1-201ENSMUST00000225614 1132 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 AC125532.1-201ENSMUST00000216210 2334 ntBASIC5.58□□□□□ -1.52
Upf1Q9EPU0 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Upf1Q9EPU0 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm24987-201ENSMUST00000104453 134 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm15399-201ENSMUST00000118055 724 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm14669-201ENSMUST00000118841 250 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm11830-201ENSMUST00000120175 561 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm14129-201ENSMUST00000122436 291 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm22343-201ENSMUST00000122648 286 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm25970-201ENSMUST00000157165 86 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Mir3066-201ENSMUST00000175296 83 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm13249-201ENSMUST00000177803 345 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm13144-201ENSMUST00000179385 345 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm27528-201ENSMUST00000183544 205 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm27161-201ENSMUST00000183960 562 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm6075-201ENSMUST00000186816 486 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm43035-201ENSMUST00000197626 517 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm7753-201ENSMUST00000221007 867 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 AC104832.1-201ENSMUST00000222938 550 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 AC159621.1-201ENSMUST00000223249 163 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 n-R5s94-201ENSMUST00000082573 119 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm23423-201ENSMUST00000082782 106 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm22868-201ENSMUST00000083955 164 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm26111-201ENSMUST00000083969 106 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm7452-202ENSMUST00000202891 3039 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf1Q9EPU0 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm25833-201ENSMUST00000104137 133 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm13250-201ENSMUST00000117209 753 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm25909-201ENSMUST00000157619 121 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm24853-201ENSMUST00000158026 121 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm23024-201ENSMUST00000158770 292 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm25999-201ENSMUST00000175398 133 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm28283-201ENSMUST00000185509 178 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm28314-201ENSMUST00000191276 345 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms