Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm28010-201ENSMUST00000179485 126 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm27538-201ENSMUST00000185065 294 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm36934-201ENSMUST00000192007 306 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm43345-201ENSMUST00000199484 269 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm2314-201ENSMUST00000200391 586 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm45063-201ENSMUST00000203726 472 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm35857-201ENSMUST00000212739 178 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm8249-201ENSMUST00000219225 465 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm5175-202ENSMUST00000219699 529 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm8274-201ENSMUST00000219820 463 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm7204-201ENSMUST00000062591 600 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Gm22829-201ENSMUST00000083771 106 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cdc40Q9DC48 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.35□□□□□ -1.87
Cdc40Q9DC48 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm11488-201ENSMUST00000117277 863 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm6797-201ENSMUST00000119440 512 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm13511-201ENSMUST00000121167 363 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm14903-201ENSMUST00000122435 537 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm22107-201ENSMUST00000122548 100 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm23168-201ENSMUST00000157156 143 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm24059-201ENSMUST00000157493 312 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm25185-201ENSMUST00000157754 96 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm24930-201ENSMUST00000158315 83 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm25369-201ENSMUST00000158848 132 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm16147-201ENSMUST00000162143 373 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm26915-201ENSMUST00000183080 748 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm37698-201ENSMUST00000192605 463 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm37431-201ENSMUST00000195102 111 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm17967-201ENSMUST00000195319 647 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm17987-201ENSMUST00000206902 603 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm7639-201ENSMUST00000212608 484 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Olfr936-202ENSMUST00000216912 937 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Snord15a-201ENSMUST00000083888 148 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.34□□□□□ -1.87
Cdc40Q9DC48 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.34□□□□□ -1.88
Cdc40Q9DC48 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Cdc40Q9DC48 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Cdc40Q9DC48 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Cdc40Q9DC48 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm24096-201ENSMUST00000103905 110 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm14687-201ENSMUST00000120206 363 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm14591-201ENSMUST00000120407 518 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm15387-201ENSMUST00000120421 648 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm27903-201ENSMUST00000175482 126 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm27155-201ENSMUST00000183716 898 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm28155-201ENSMUST00000191066 151 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm28314-201ENSMUST00000191276 345 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Trbv8-201ENSMUST00000194020 285 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm36943-201ENSMUST00000194422 282 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm5552-201ENSMUST00000197149 515 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm42926-201ENSMUST00000200496 697 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms