Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm24627-201ENSMUST00000122764 138 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm22730-201ENSMUST00000158085 171 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm22908-201ENSMUST00000177620 110 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm27733-201ENSMUST00000184803 68 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm29064-201ENSMUST00000187014 813 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm19280-201ENSMUST00000190191 205 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm7182-201ENSMUST00000193351 732 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm43090-201ENSMUST00000202459 314 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Ccdc3Q9D6Y1 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.34□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ccdc3Q9D6Y1 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Ccdc3Q9D6Y1 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Ccdc3Q9D6Y1 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm12722-201ENSMUST00000118507 493 ntBASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm4910-201ENSMUST00000119605 366 ntBASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm23592-201ENSMUST00000157859 117 ntBASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm23775-201ENSMUST00000158991 249 ntBASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm24811-201ENSMUST00000175313 100 ntBASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm7634-201ENSMUST00000185778 553 ntBASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm22304-201ENSMUST00000082688 129 ntBASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm24917-201ENSMUST00000083935 104 ntBASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm24118-201ENSMUST00000103972 126 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm12149-201ENSMUST00000117511 654 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm12025-201ENSMUST00000117768 144 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm11708-201ENSMUST00000119530 832 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm14101-201ENSMUST00000121502 473 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm14810-201ENSMUST00000121628 486 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm26020-201ENSMUST00000122729 183 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm23824-201ENSMUST00000158741 276 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm19791-201ENSMUST00000180398 859 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm28594-201ENSMUST00000187022 661 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm36382-201ENSMUST00000198892 541 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm18597-201ENSMUST00000209519 694 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm7948-201ENSMUST00000212607 844 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms