Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm29573-201ENSMUST00000190291 919 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm7449-201ENSMUST00000194393 663 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm43070-201ENSMUST00000196938 415 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm43975-201ENSMUST00000203023 481 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm8774-201ENSMUST00000203621 692 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm19987-201ENSMUST00000216339 499 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 AC153646.1-201ENSMUST00000223229 1279 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 AC131085.1-201ENSMUST00000224746 656 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm5548-201ENSMUST00000055878 397 ntBASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Vps28Q9D1C8 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm12982-201ENSMUST00000117408 190 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm12509-201ENSMUST00000118033 609 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm12873-201ENSMUST00000119988 422 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm13973-201ENSMUST00000121371 894 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm23228-201ENSMUST00000157296 270 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm23702-201ENSMUST00000158840 130 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm26362-201ENSMUST00000158865 315 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm17030-201ENSMUST00000167016 393 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Mir8118-201ENSMUST00000183962 129 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm45031-201ENSMUST00000206800 288 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm46998-201ENSMUST00000221444 330 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm9628-201ENSMUST00000222169 725 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 AC154552.5-201ENSMUST00000222352 207 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 AC167977.2-201ENSMUST00000225676 682 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Mir34b-201ENSMUST00000083558 84 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Vps28Q9D1C8 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.18□□□□□ -1.74
Vps28Q9D1C8 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm6913-201ENSMUST00000100019 348 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm24951-201ENSMUST00000102182 109 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm16431-201ENSMUST00000117454 431 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm13478-201ENSMUST00000118312 413 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm14473-201ENSMUST00000122269 557 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm22816-201ENSMUST00000157450 117 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm24060-201ENSMUST00000157494 95 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm22307-201ENSMUST00000180019 107 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm43853-201ENSMUST00000197162 301 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.17□□□□□ -1.74
Vps28Q9D1C8 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Vps28Q9D1C8 AC122937.1-201ENSMUST00000226405 793 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Vps28Q9D1C8 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms