Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm8231-201ENSMUST00000221617 783 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm3829-201ENSMUST00000222362 619 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Olfr713-201ENSMUST00000098139 975 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.18□□□□□ -1.74
Smc1aQ9CU62 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm25765-201ENSMUST00000104100 132 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm16400-201ENSMUST00000116523 1029 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm15018-201ENSMUST00000117090 633 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm11923-201ENSMUST00000118135 508 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm14795-201ENSMUST00000118461 471 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm23865-201ENSMUST00000157723 97 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm24811-201ENSMUST00000175313 100 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm28011-201ENSMUST00000184097 175 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm29598-201ENSMUST00000188996 588 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm19243-201ENSMUST00000198592 269 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm43368-201ENSMUST00000200638 409 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm42758-201ENSMUST00000202146 283 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm336-201ENSMUST00000186376 1480 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.17□□□□□ -1.74
Smc1aQ9CU62 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Smc1aQ9CU62 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm24987-201ENSMUST00000104453 134 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm15108-201ENSMUST00000116160 803 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm11372-201ENSMUST00000117348 570 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm14383-201ENSMUST00000121637 386 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm15111-201ENSMUST00000122142 878 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm13852-201ENSMUST00000122350 242 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm24314-201ENSMUST00000158274 123 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm16563-201ENSMUST00000162673 423 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm18043-201ENSMUST00000216741 739 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm5175-202ENSMUST00000219699 529 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm18116-201ENSMUST00000220920 537 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm23925-201ENSMUST00000082471 132 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm23736-201ENSMUST00000082553 75 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.16□□□□□ -1.74
Smc1aQ9CU62 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Smc1aQ9CU62 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm11718-201ENSMUST00000119942 537 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm7350-201ENSMUST00000120964 636 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm24417-201ENSMUST00000178123 79 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm24653-201ENSMUST00000178541 79 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Gm25934-201ENSMUST00000178642 79 ntBASIC4.15□□□□□ -1.75
Smc1aQ9CU62 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms