Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Use1Q9CQ56 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Use1Q9CQ56 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Use1Q9CQ56 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Use1Q9CQ56 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.38□□□□□ -1.87
Use1Q9CQ56 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Use1Q9CQ56 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm11372-201ENSMUST00000117348 570 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm12495-201ENSMUST00000119750 447 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.37□□□□□ -1.87
Use1Q9CQ56 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm23167-201ENSMUST00000157155 103 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm25438-201ENSMUST00000158281 110 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm8296-201ENSMUST00000185597 524 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.37□□□□□ -1.87
Use1Q9CQ56 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm20162-201ENSMUST00000193629 871 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm3933-201ENSMUST00000195391 439 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm6842-201ENSMUST00000211361 390 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm18644-201ENSMUST00000211458 815 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Use1Q9CQ56 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Use1Q9CQ56 Mir325-201ENSMUST00000083491 98 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Gm23058-201ENSMUST00000093703 107 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Use1Q9CQ56 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.37□□□□□ -1.87
Use1Q9CQ56 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Use1Q9CQ56 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Use1Q9CQ56 Mir804-201ENSMUST00000103251 95 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm11797-201ENSMUST00000121336 754 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm22531-201ENSMUST00000158819 140 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm25369-201ENSMUST00000158848 132 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm16290-201ENSMUST00000161175 474 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm20399-201ENSMUST00000174652 132 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm3454-201ENSMUST00000185571 412 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm37001-201ENSMUST00000193377 190 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm7449-201ENSMUST00000194393 663 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm42926-201ENSMUST00000200496 697 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm43198-201ENSMUST00000200927 326 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm35876-201ENSMUST00000205044 459 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm25205-201ENSMUST00000082841 103 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 AF357341-201ENSMUST00000083088 75 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.36□□□□□ -1.87
Use1Q9CQ56 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Use1Q9CQ56 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Gm6429-201ENSMUST00000117144 475 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Gm25271-201ENSMUST00000157273 290 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 Mir3473c-201ENSMUST00000175262 81 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Gm6501-201ENSMUST00000187178 916 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 Trbv8-201ENSMUST00000194020 285 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 Gm34005-201ENSMUST00000215834 282 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.35□□□□□ -1.87
Use1Q9CQ56 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
Use1Q9CQ56 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.35□□□□□ -1.87
Use1Q9CQ56 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Snord66-201ENSMUST00000104051 75 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm24831-201ENSMUST00000116778 126 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm5757-201ENSMUST00000117494 528 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm12543-201ENSMUST00000120410 543 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm18415-201ENSMUST00000177464 647 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Mir713-201ENSMUST00000178651 108 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms