Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm18189-201ENSMUST00000218153 1951 ntBASIC2.97□□□□□ -1.93
Cdh23Q99PF4 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Cdh23Q99PF4 Gm22532-201ENSMUST00000158822 140 ntBASIC2.97□□□□□ -1.93
Cdh23Q99PF4 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.97□□□□□ -1.93
Cdh23Q99PF4 Gm28877-201ENSMUST00000191349 604 ntBASIC2.97□□□□□ -1.93
Cdh23Q99PF4 Gm8874-201ENSMUST00000196826 286 ntBASIC2.97□□□□□ -1.93
Cdh23Q99PF4 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
Cdh23Q99PF4 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
Cdh23Q99PF4 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Gm43696-201ENSMUST00000199385 6071 ntBASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC2.96□□□□□ -1.94
Cdh23Q99PF4 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Gm38076-201ENSMUST00000193889 450 ntBASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.96□□□□□ -1.94
Cdh23Q99PF4 n-R5s45-201ENSMUST00000122592 110 ntBASIC2.96□□□□□ -1.94
Cdh23Q99PF4 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.96□□□□□ -1.94
Cdh23Q99PF4 AC154640.2-201ENSMUST00000226324 472 ntBASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Cdh23Q99PF4 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm23548-201ENSMUST00000158963 106 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm9890-201ENSMUST00000171867 537 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm24082-201ENSMUST00000175175 83 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Mir3569-201ENSMUST00000185080 58 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm29335-201ENSMUST00000188361 459 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm8274-201ENSMUST00000219820 463 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm23472-201ENSMUST00000101806 191 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm13555-201ENSMUST00000121668 319 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm24497-201ENSMUST00000177868 191 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm25939-201ENSMUST00000179876 191 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm29602-201ENSMUST00000186887 442 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm24950-201ENSMUST00000082768 191 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm23444-201ENSMUST00000082922 191 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm23971-201ENSMUST00000083317 191 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm23849-201ENSMUST00000083833 191 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm26316-201ENSMUST00000083886 191 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Rnu2-10-201ENSMUST00000084010 191 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm13121-201ENSMUST00000120637 632 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm25113-201ENSMUST00000157185 143 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm23231-201ENSMUST00000157299 104 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Gm18388-201ENSMUST00000222339 557 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC2.95□□□□□ -1.94
Cdh23Q99PF4 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm9078-201ENSMUST00000119126 617 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm13406-201ENSMUST00000121991 256 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm44157-201ENSMUST00000204720 410 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Cdh23Q99PF4 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Cdh23Q99PF4 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Mir669d-201ENSMUST00000104644 121 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm12954-201ENSMUST00000118610 611 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm12288-201ENSMUST00000121054 1282 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Mir6715-201ENSMUST00000184990 57 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm14387-201ENSMUST00000121827 2055 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm15021-201ENSMUST00000117832 742 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm28625-201ENSMUST00000188309 205 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm43491-201ENSMUST00000197133 784 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Gm44253-201ENSMUST00000203387 628 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.94□□□□□ -1.94
Cdh23Q99PF4 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
Cdh23Q99PF4 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Cdh23Q99PF4 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Cdh23Q99PF4 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Cdh23Q99PF4 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.93□□□□□ -1.94
Cdh23Q99PF4 Gm12118-201ENSMUST00000119766 532 ntBASIC2.93□□□□□ -1.94
Cdh23Q99PF4 Gm21960-201ENSMUST00000181924 452 ntBASIC2.93□□□□□ -1.94
Cdh23Q99PF4 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.93□□□□□ -1.94
Cdh23Q99PF4 Gm19366-201ENSMUST00000206996 156 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms