Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm3835-201ENSMUST00000120752 403 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm7350-201ENSMUST00000120964 636 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm16471-201ENSMUST00000121940 618 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm11233-201ENSMUST00000122357 634 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Mir5098-201ENSMUST00000175320 82 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm27903-201ENSMUST00000175482 126 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm27733-201ENSMUST00000184803 68 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm29563-201ENSMUST00000187249 496 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm36934-201ENSMUST00000192007 306 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm43232-201ENSMUST00000201346 364 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm18944-201ENSMUST00000207672 643 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm5917-201ENSMUST00000217638 721 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm2710-201ENSMUST00000073196 603 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm23846-201ENSMUST00000083835 107 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Cstf1Q99LC2 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm26273-201ENSMUST00000104180 131 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm7421-201ENSMUST00000119298 639 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm14240-201ENSMUST00000120353 546 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm7365-201ENSMUST00000120877 639 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm6058-201ENSMUST00000154261 399 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm26088-201ENSMUST00000157896 131 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm25490-201ENSMUST00000158734 130 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm24734-201ENSMUST00000158860 262 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm28920-201ENSMUST00000189957 699 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm6680-201ENSMUST00000192789 950 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm18900-201ENSMUST00000193218 584 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm42850-201ENSMUST00000202094 201 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm45735-201ENSMUST00000212779 319 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.7□□□□□ -1.82
Cstf1Q99LC2 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm15933-201ENSMUST00000117215 616 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm14101-201ENSMUST00000121502 473 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm25860-201ENSMUST00000158252 126 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm26171-201ENSMUST00000158422 131 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm3851-201ENSMUST00000168653 318 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms