Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Gm40598-201ENSMUST00000222953 547 ntBASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Gm9309-201ENSMUST00000223537 546 ntBASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm23530-201ENSMUST00000104564 137 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm16026-202ENSMUST00000159695 772 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm43090-201ENSMUST00000202459 314 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm8423-201ENSMUST00000211387 607 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm29884-201ENSMUST00000218403 453 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm46369-201ENSMUST00000221577 401 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Mir132-201ENSMUST00000083603 66 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.31□□□□□ -1.88
Ccdc28aQ8CEI3 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm24125-201ENSMUST00000104105 137 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm15244-201ENSMUST00000121122 130 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm6079-201ENSMUST00000121356 404 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm7846-201ENSMUST00000145844 274 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm24061-201ENSMUST00000157489 120 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28534-201ENSMUST00000187744 676 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm34091-201ENSMUST00000200875 604 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm18597-201ENSMUST00000209519 694 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm45689-201ENSMUST00000210522 133 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm23460-201ENSMUST00000083258 109 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm25004-201ENSMUST00000083811 161 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.3□□□□□ -1.88
Ccdc28aQ8CEI3 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm24096-201ENSMUST00000103905 110 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm11625-201ENSMUST00000119535 296 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm11385-201ENSMUST00000121513 570 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm25519-201ENSMUST00000158392 127 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm16569-201ENSMUST00000160526 314 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm23799-201ENSMUST00000175559 120 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm22917-201ENSMUST00000180116 110 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm27796-201ENSMUST00000183863 261 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms