Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm7530-201ENSMUST00000218466 605 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm23452-201ENSMUST00000083327 107 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm26176-201ENSMUST00000083795 105 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm10212-201ENSMUST00000087884 324 ntBASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc28bQ8CEG5 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm26067-201ENSMUST00000103789 110 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Mir466f-3-201ENSMUST00000104788 94 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm11344-201ENSMUST00000122011 335 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm22794-201ENSMUST00000157228 306 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm3221-201ENSMUST00000164869 440 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm24811-201ENSMUST00000175313 100 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm5268-201ENSMUST00000189212 940 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm42474-201ENSMUST00000201073 505 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm6051-201ENSMUST00000201529 352 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm8745-201ENSMUST00000207846 782 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 AC153526.1-201ENSMUST00000219750 190 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm24707-201ENSMUST00000082812 107 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm25582-201ENSMUST00000083412 110 ntBASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc28bQ8CEG5 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Snora64-201ENSMUST00000104521 134 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm26376-201ENSMUST00000104784 110 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm13268-201ENSMUST00000117485 433 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm16412-201ENSMUST00000121602 273 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm14162-201ENSMUST00000121985 601 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm25177-201ENSMUST00000122634 117 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm15733-201ENSMUST00000132957 242 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm24198-201ENSMUST00000157812 108 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm23257-201ENSMUST00000158322 132 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm10177-202ENSMUST00000161698 207 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm21809-201ENSMUST00000178495 468 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm17412-201ENSMUST00000179261 468 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm28976-201ENSMUST00000188070 144 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Gm36985-201ENSMUST00000195595 379 ntBASIC3.74□□□□□ -1.81
Ccdc28bQ8CEG5 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms