Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm22899-201ENSMUST00000104540 131 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm14172-201ENSMUST00000118255 644 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm14293-201ENSMUST00000118528 577 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm13602-201ENSMUST00000122405 493 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm25806-201ENSMUST00000122782 122 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm24498-201ENSMUST00000158445 102 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Mir5098-201ENSMUST00000175320 82 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm26177-201ENSMUST00000178683 107 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm38261-201ENSMUST00000192608 316 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm8069-201ENSMUST00000197887 154 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm43114-201ENSMUST00000198298 343 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm19131-201ENSMUST00000203408 789 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm45048-201ENSMUST00000207058 429 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm17779-201ENSMUST00000213395 394 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 AC124569.4-201ENSMUST00000223830 1220 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 AC154329.2-201ENSMUST00000225257 383 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 AC162857.1-201ENSMUST00000226614 400 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 AC139845.2-201ENSMUST00000227504 436 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.79□□□□□ -1.64
Ccdc87Q8CDL9 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm24544-201ENSMUST00000103862 110 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm11219-201ENSMUST00000118565 358 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm14835-201ENSMUST00000119039 315 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm11830-201ENSMUST00000120175 561 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm7840-201ENSMUST00000122086 533 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm24774-201ENSMUST00000157384 134 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm22076-201ENSMUST00000158601 84 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Mir6907-201ENSMUST00000183764 71 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm28489-201ENSMUST00000186655 316 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Trbv22-201ENSMUST00000191697 291 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm18382-201ENSMUST00000194394 582 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm43232-201ENSMUST00000201346 364 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm2446-201ENSMUST00000220144 772 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 AC109172.2-201ENSMUST00000228792 381 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm22810-201ENSMUST00000082741 158 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.78□□□□□ -1.64
Ccdc87Q8CDL9 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.65
Ccdc87Q8CDL9 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms