Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm37866-201ENSMUST00000191950 696 ntBASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Trbv8-201ENSMUST00000194020 285 ntBASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Gm38098-201ENSMUST00000194115 241 ntBASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Gm42474-201ENSMUST00000201073 505 ntBASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Gm18644-201ENSMUST00000211458 815 ntBASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Snord14e-201ENSMUST00000082857 90 ntBASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Mir132-201ENSMUST00000083603 66 ntBASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.31□□□□□ -1.72
Atg4aQ8C9S8 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm25833-201ENSMUST00000104137 133 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm12118-201ENSMUST00000119766 532 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm12691-201ENSMUST00000120186 456 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm14037-201ENSMUST00000120576 313 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm25967-201ENSMUST00000157168 147 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm24241-201ENSMUST00000157787 145 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm24961-201ENSMUST00000157918 184 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm25438-201ENSMUST00000158281 110 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm23775-201ENSMUST00000158991 249 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm21809-201ENSMUST00000178495 468 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm17412-201ENSMUST00000179261 468 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Mir6238-201ENSMUST00000184140 129 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm4854-201ENSMUST00000185902 574 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm37000-201ENSMUST00000193058 428 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm8785-201ENSMUST00000220259 487 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm5176-202ENSMUST00000220267 583 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 AC122937.1-201ENSMUST00000226405 793 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm25581-201ENSMUST00000083410 164 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.3□□□□□ -1.72
Atg4aQ8C9S8 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm16400-201ENSMUST00000116523 1029 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm12748-201ENSMUST00000120763 504 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm13009-201ENSMUST00000121307 267 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm22277-201ENSMUST00000157204 277 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm23317-201ENSMUST00000157999 129 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm17655-201ENSMUST00000167969 255 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm37219-201ENSMUST00000192036 926 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Igkv13-82-201ENSMUST00000200308 346 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm44355-201ENSMUST00000200417 104 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm7786-201ENSMUST00000210494 436 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 AC115047.1-201ENSMUST00000213795 322 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Snord35b-201ENSMUST00000082833 87 ntBASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.29□□□□□ -1.72
Atg4aQ8C9S8 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms