Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm38356-201ENSMUST00000194313 408 ntBASIC4.32□□□□□ -1.72
Usp47Q8BY87 Gm38334-201ENSMUST00000195060 313 ntBASIC4.32□□□□□ -1.72
Usp47Q8BY87 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.32□□□□□ -1.72
Usp47Q8BY87 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC4.32□□□□□ -1.72
Usp47Q8BY87 Gm44157-201ENSMUST00000204720 410 ntBASIC4.32□□□□□ -1.72
Usp47Q8BY87 Gm45200-201ENSMUST00000207434 919 ntBASIC4.32□□□□□ -1.72
Usp47Q8BY87 Gm5649-201ENSMUST00000217918 951 ntBASIC4.32□□□□□ -1.72
Usp47Q8BY87 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.32□□□□□ -1.72
Usp47Q8BY87 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Usp47Q8BY87 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Usp47Q8BY87 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Usp47Q8BY87 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Usp47Q8BY87 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Usp47Q8BY87 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.31□□□□□ -1.72
Usp47Q8BY87 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Usp47Q8BY87 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Usp47Q8BY87 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Usp47Q8BY87 Gm13532-201ENSMUST00000120373 240 ntBASIC4.31□□□□□ -1.72
Usp47Q8BY87 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.31□□□□□ -1.72
Usp47Q8BY87 Gm4222-201ENSMUST00000165784 470 ntBASIC4.31□□□□□ -1.72
Usp47Q8BY87 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Usp47Q8BY87 Gm26928-201ENSMUST00000182674 572 ntBASIC4.31□□□□□ -1.72
Usp47Q8BY87 Gm28614-201ENSMUST00000186483 458 ntBASIC4.31□□□□□ -1.72
Usp47Q8BY87 Gm24350-202ENSMUST00000198309 132 ntBASIC4.31□□□□□ -1.72
Usp47Q8BY87 Igkv1-115-201ENSMUST00000198714 302 ntBASIC4.31□□□□□ -1.72
Usp47Q8BY87 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.31□□□□□ -1.72
Usp47Q8BY87 AC124537.1-201ENSMUST00000222890 159 ntBASIC4.31□□□□□ -1.72
Usp47Q8BY87 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Usp47Q8BY87 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Usp47Q8BY87 Gm26121-201ENSMUST00000083364 162 ntBASIC4.31□□□□□ -1.72
Usp47Q8BY87 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Usp47Q8BY87 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Usp47Q8BY87 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Usp47Q8BY87 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Mir466i-201ENSMUST00000116924 121 ntBASIC4.3□□□□□ -1.72
Usp47Q8BY87 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Gm26215-201ENSMUST00000158584 139 ntBASIC4.3□□□□□ -1.72
Usp47Q8BY87 Gm18505-201ENSMUST00000187360 790 ntBASIC4.3□□□□□ -1.72
Usp47Q8BY87 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC4.3□□□□□ -1.72
Usp47Q8BY87 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Gm21112-201ENSMUST00000212224 578 ntBASIC4.3□□□□□ -1.72
Usp47Q8BY87 Gm7760-201ENSMUST00000212265 578 ntBASIC4.3□□□□□ -1.72
Usp47Q8BY87 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.3□□□□□ -1.72
Usp47Q8BY87 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.3□□□□□ -1.72
Usp47Q8BY87 Gm6562-201ENSMUST00000221903 464 ntBASIC4.3□□□□□ -1.72
Usp47Q8BY87 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Gm42684-201ENSMUST00000197663 3615 ntBASIC4.3□□□□□ -1.72
Usp47Q8BY87 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Usp47Q8BY87 Mir291a-201ENSMUST00000104815 82 ntBASIC4.29□□□□□ -1.72
Usp47Q8BY87 Gm12723-201ENSMUST00000120700 451 ntBASIC4.29□□□□□ -1.72
Usp47Q8BY87 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.29□□□□□ -1.72
Usp47Q8BY87 Gm22011-201ENSMUST00000158790 123 ntBASIC4.29□□□□□ -1.72
Usp47Q8BY87 Gm17187-201ENSMUST00000164622 410 ntBASIC4.29□□□□□ -1.72
Usp47Q8BY87 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC4.29□□□□□ -1.72
Usp47Q8BY87 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.29□□□□□ -1.72
Usp47Q8BY87 LOC667541-201ENSMUST00000223408 278 ntBASIC4.29□□□□□ -1.72
Usp47Q8BY87 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Usp47Q8BY87 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.29□□□□□ -1.72
Usp47Q8BY87 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Usp47Q8BY87 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Usp47Q8BY87 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.29□□□□□ -1.72
Usp47Q8BY87 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.29□□□□□ -1.72
Usp47Q8BY87 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Usp47Q8BY87 Gm11877-201ENSMUST00000118921 852 ntBASIC4.28□□□□□ -1.72
Usp47Q8BY87 Gm14788-201ENSMUST00000119457 375 ntBASIC4.28□□□□□ -1.72
Usp47Q8BY87 Gm12731-201ENSMUST00000120932 268 ntBASIC4.28□□□□□ -1.72
Usp47Q8BY87 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.28□□□□□ -1.72
Usp47Q8BY87 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.28□□□□□ -1.72
Usp47Q8BY87 Gm29045-201ENSMUST00000187278 698 ntBASIC4.28□□□□□ -1.72
Usp47Q8BY87 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.28□□□□□ -1.72
Usp47Q8BY87 Ighv1-41-201ENSMUST00000194414 329 ntBASIC4.28□□□□□ -1.72
Usp47Q8BY87 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
Usp47Q8BY87 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Usp47Q8BY87 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Usp47Q8BY87 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.28□□□□□ -1.72
Usp47Q8BY87 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Usp47Q8BY87 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Usp47Q8BY87 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.28□□□□□ -1.72
Usp47Q8BY87 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Usp47Q8BY87 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Usp47Q8BY87 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.73
Usp47Q8BY87 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Usp47Q8BY87 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.27□□□□□ -1.73
Usp47Q8BY87 Gm22116-201ENSMUST00000158791 141 ntBASIC4.27□□□□□ -1.73
Usp47Q8BY87 Gm18522-201ENSMUST00000173947 650 ntBASIC4.27□□□□□ -1.73
Usp47Q8BY87 Gm21893-201ENSMUST00000179119 397 ntBASIC4.27□□□□□ -1.73
Usp47Q8BY87 Gm33973-201ENSMUST00000195148 534 ntBASIC4.27□□□□□ -1.73
Usp47Q8BY87 Gm43601-201ENSMUST00000196294 945 ntBASIC4.27□□□□□ -1.73
Usp47Q8BY87 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.27□□□□□ -1.73
Usp47Q8BY87 AC166830.1-201ENSMUST00000224201 533 ntBASIC4.27□□□□□ -1.73
Usp47Q8BY87 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms