Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm14975-201ENSMUST00000118741 664 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm14352-201ENSMUST00000119250 449 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm12607-201ENSMUST00000120724 493 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm13000-201ENSMUST00000120937 496 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm6568-201ENSMUST00000122274 697 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm23171-201ENSMUST00000157159 264 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm25605-201ENSMUST00000158364 124 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm29475-201ENSMUST00000190767 312 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm29524-201ENSMUST00000190819 699 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm43855-201ENSMUST00000197462 507 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Mir383-201ENSMUST00000083523 70 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm24490-201ENSMUST00000083803 98 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 AC164297.6-201ENSMUST00000224643 1568 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp43Q8BUM9 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
Usp43Q8BUM9 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.21□□□□□ -1.73
Usp43Q8BUM9 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Usp43Q8BUM9 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
Usp43Q8BUM9 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Usp43Q8BUM9 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
Usp43Q8BUM9 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm24067-201ENSMUST00000104514 85 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm8666-201ENSMUST00000117517 292 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm12173-201ENSMUST00000117622 273 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm14677-201ENSMUST00000117866 486 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm11869-201ENSMUST00000118701 329 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm13170-201ENSMUST00000119716 643 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm12190-201ENSMUST00000120001 187 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm22514-201ENSMUST00000122547 308 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm23352-201ENSMUST00000158428 64 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm7870-201ENSMUST00000184467 616 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm27919-201ENSMUST00000185163 107 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm42622-201ENSMUST00000197229 355 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm19366-201ENSMUST00000206996 156 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 AC069561.2-201ENSMUST00000217596 420 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Usp43Q8BUM9 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.21□□□□□ -1.74
Usp43Q8BUM9 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Usp43Q8BUM9 Mir92b-201ENSMUST00000102300 83 ntBASIC4.2□□□□□ -1.74
Usp43Q8BUM9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Usp43Q8BUM9 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.2□□□□□ -1.74
Usp43Q8BUM9 Gm14771-201ENSMUST00000118249 203 ntBASIC4.2□□□□□ -1.74
Usp43Q8BUM9 Gm15916-201ENSMUST00000118355 736 ntBASIC4.2□□□□□ -1.74
Usp43Q8BUM9 Gm12016-201ENSMUST00000119079 681 ntBASIC4.2□□□□□ -1.74
Usp43Q8BUM9 Gm23789-201ENSMUST00000122536 301 ntBASIC4.2□□□□□ -1.74
Usp43Q8BUM9 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Usp43Q8BUM9 Gm25965-201ENSMUST00000157170 93 ntBASIC4.2□□□□□ -1.74
Usp43Q8BUM9 Gm16318-201ENSMUST00000162402 601 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms