Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.45□□□□□ -1.7
CtcfQ61164 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CtcfQ61164 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CtcfQ61164 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
CtcfQ61164 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CtcfQ61164 Snord14e-201ENSMUST00000082857 90 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Gm25582-201ENSMUST00000083412 110 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CtcfQ61164 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CtcfQ61164 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CtcfQ61164 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.45□□□□□ -1.7
CtcfQ61164 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CtcfQ61164 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CtcfQ61164 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CtcfQ61164 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CtcfQ61164 Gm23226-201ENSMUST00000116927 103 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm15076-201ENSMUST00000117076 474 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm15916-201ENSMUST00000118355 736 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm11357-201ENSMUST00000119758 954 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm5060-201ENSMUST00000120072 599 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm14939-201ENSMUST00000120347 680 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm16411-201ENSMUST00000122164 1100 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm22204-201ENSMUST00000122654 327 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.44□□□□□ -1.7
CtcfQ61164 Gm16331-201ENSMUST00000144274 498 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Gm22793-201ENSMUST00000157227 330 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm26187-201ENSMUST00000157693 101 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm24939-201ENSMUST00000158325 137 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm9613-201ENSMUST00000171662 196 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm24969-201ENSMUST00000180331 79 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.44□□□□□ -1.7
CtcfQ61164 Gm27805-201ENSMUST00000184513 79 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm27538-201ENSMUST00000185065 294 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm29228-201ENSMUST00000185489 418 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm29634-201ENSMUST00000188467 696 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm28699-201ENSMUST00000189193 696 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm18775-201ENSMUST00000190763 586 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.44□□□□□ -1.7
CtcfQ61164 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.44□□□□□ -1.7
CtcfQ61164 Gm44118-201ENSMUST00000204665 229 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm18410-201ENSMUST00000207199 577 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.44□□□□□ -1.7
CtcfQ61164 Gm44946-201ENSMUST00000208425 572 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 AC157017.2-201ENSMUST00000218354 777 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.44□□□□□ -1.7
CtcfQ61164 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.44□□□□□ -1.7
CtcfQ61164 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
CtcfQ61164 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CtcfQ61164 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Gm23628-201ENSMUST00000082464 173 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm24707-201ENSMUST00000082812 107 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm25004-201ENSMUST00000083811 161 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CtcfQ61164 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.44□□□□□ -1.7
CtcfQ61164 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CtcfQ61164 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CtcfQ61164 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CtcfQ61164 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CtcfQ61164 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC4.43□□□□□ -1.7
CtcfQ61164 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CtcfQ61164 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CtcfQ61164 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CtcfQ61164 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CtcfQ61164 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CtcfQ61164 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Gm6373-201ENSMUST00000121026 360 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Gm4852-201ENSMUST00000121202 729 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Gm13471-201ENSMUST00000122057 433 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.43□□□□□ -1.7
CtcfQ61164 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm11281-201ENSMUST00000141391 576 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm23501-201ENSMUST00000157744 256 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms