Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm23167-201ENSMUST00000157155 103 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm24061-201ENSMUST00000157489 120 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm24976-201ENSMUST00000158972 135 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm20542-201ENSMUST00000174582 372 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Mir6414-201ENSMUST00000183685 82 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Mir6345-201ENSMUST00000184286 128 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm28552-201ENSMUST00000190725 388 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm38214-201ENSMUST00000192581 988 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm37002-201ENSMUST00000194560 373 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm37993-201ENSMUST00000195301 988 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm5552-201ENSMUST00000197149 515 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm18410-201ENSMUST00000207199 577 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm20948-201ENSMUST00000211091 449 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm45727-201ENSMUST00000212886 572 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm8785-201ENSMUST00000220259 487 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Trim38Q5SZ99 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Mir551b-201ENSMUST00000102165 98 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm14299-201ENSMUST00000117586 397 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm11718-201ENSMUST00000119942 537 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm13865-201ENSMUST00000120957 865 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm11403-201ENSMUST00000122195 369 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm23234-201ENSMUST00000157304 134 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Mir6401-201ENSMUST00000184499 109 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm38018-201ENSMUST00000195651 540 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm43155-201ENSMUST00000202661 494 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm6240-201ENSMUST00000208014 473 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm17829-201ENSMUST00000219782 344 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm9818-201ENSMUST00000050900 255 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm5548-201ENSMUST00000055878 397 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm23443-201ENSMUST00000082916 128 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm25481-201ENSMUST00000083221 158 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Trim38Q5SZ99 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.97□□□□□ -1.77
Trim38Q5SZ99 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.96□□□□□ -1.77
Trim38Q5SZ99 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Trim38Q5SZ99 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.96□□□□□ -1.77
Trim38Q5SZ99 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm2348-201ENSMUST00000108782 300 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm11923-201ENSMUST00000118135 508 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm12691-201ENSMUST00000120186 456 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm15157-201ENSMUST00000121852 702 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm11692-201ENSMUST00000122121 902 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm24550-201ENSMUST00000158648 279 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm19203-201ENSMUST00000174049 939 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm26365-201ENSMUST00000179177 94 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm10067-201ENSMUST00000179462 348 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm20574-201ENSMUST00000182867 917 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim38Q5SZ99 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim38Q5SZ99 Gm38201-201ENSMUST00000192143 387 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms