Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 AC125543.1-201ENSMUST00000222778 101 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Diaph3-206ENSMUST00000226745 713 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Snord15a-201ENSMUST00000083888 148 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm25682-201ENSMUST00000083942 164 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.09□□□□□ -2.07
Trav3-1Q5R1I8 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.09□□□□□ -2.08
Trav3-1Q5R1I8 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Trav3-1Q5R1I8 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm14512-201ENSMUST00000117924 230 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm2288-201ENSMUST00000118560 638 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm11645-201ENSMUST00000121589 649 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm26088-201ENSMUST00000157896 131 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Mir3080-201ENSMUST00000175010 79 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Mir5136-201ENSMUST00000175573 76 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm27044-201ENSMUST00000183033 796 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm27883-201ENSMUST00000183941 102 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm27233-201ENSMUST00000184030 307 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Mir8096-201ENSMUST00000184526 127 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm6802-202ENSMUST00000186566 126 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm21489-201ENSMUST00000189668 818 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm37934-201ENSMUST00000192902 402 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm44399-201ENSMUST00000205043 226 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm20586-201ENSMUST00000210122 547 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm6056-201ENSMUST00000221253 488 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 AC124746.2-201ENSMUST00000226594 427 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm22684-201ENSMUST00000082849 132 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.08□□□□□ -2.08
Trav3-1Q5R1I8 Gm5155-201ENSMUST00000072381 2841 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm7853-201ENSMUST00000100708 478 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Mir294-201ENSMUST00000104710 84 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm15018-201ENSMUST00000117090 633 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm11488-201ENSMUST00000117277 863 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm12149-201ENSMUST00000117511 654 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm13273-201ENSMUST00000119737 159 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm14991-201ENSMUST00000119913 598 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm26034-201ENSMUST00000158154 116 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm24217-201ENSMUST00000158260 133 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm3077-201ENSMUST00000165903 627 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm27617-201ENSMUST00000184321 168 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm27805-201ENSMUST00000184513 79 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Mir7005-201ENSMUST00000185089 69 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm28069-201ENSMUST00000189926 214 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm28803-201ENSMUST00000190385 764 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm18384-201ENSMUST00000195974 808 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm42438-201ENSMUST00000197832 974 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm35570-201ENSMUST00000198730 681 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm9245-201ENSMUST00000200528 983 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm34224-201ENSMUST00000204606 364 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm18127-201ENSMUST00000208479 725 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm45445-201ENSMUST00000209586 232 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm19073-201ENSMUST00000219978 555 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 AC161884.2-201ENSMUST00000224513 227 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Olfr480-201ENSMUST00000071658 1029 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Gm24611-201ENSMUST00000083272 107 ntBASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav3-1Q5R1I8 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms