Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim58Q5NCC9 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm6545-201ENSMUST00000217186 1786 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm25647-201ENSMUST00000101832 78 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm25823-201ENSMUST00000101995 78 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Mir706-201ENSMUST00000102262 84 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm26423-201ENSMUST00000104277 128 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm23530-201ENSMUST00000104564 137 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm14786-201ENSMUST00000117127 944 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm15161-201ENSMUST00000117340 387 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm15103-201ENSMUST00000119893 871 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm25519-201ENSMUST00000158392 127 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm23179-201ENSMUST00000158693 304 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm24220-201ENSMUST00000177753 79 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm25988-201ENSMUST00000177759 79 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm23471-201ENSMUST00000177886 79 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm26488-201ENSMUST00000178225 79 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Spin2g-201ENSMUST00000178425 687 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm23449-201ENSMUST00000179208 79 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm25221-201ENSMUST00000180051 79 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Mir7028-201ENSMUST00000185016 64 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm29525-201ENSMUST00000189844 699 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm19280-201ENSMUST00000190191 205 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm29523-201ENSMUST00000191415 699 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm38053-201ENSMUST00000193938 160 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm36943-201ENSMUST00000194422 282 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm37002-201ENSMUST00000194560 373 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm44332-201ENSMUST00000203712 433 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm16419-201ENSMUST00000221057 625 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 LOC667541-201ENSMUST00000223408 278 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 AC174797.4-201ENSMUST00000225510 347 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Gm23136-201ENSMUST00000083425 99 ntBASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim58Q5NCC9 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm12757-201ENSMUST00000119465 800 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm28002-201ENSMUST00000184832 100 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm20776-201ENSMUST00000189940 700 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm45080-201ENSMUST00000206648 283 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm21007-201ENSMUST00000221024 326 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm9309-201ENSMUST00000223537 546 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Snora70-201ENSMUST00000083047 137 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Gm6300-201ENSMUST00000192393 1498 ntBASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim58Q5NCC9 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Trim58Q5NCC9 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.15□□□□□ -1.74
Trim58Q5NCC9 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Trim58Q5NCC9 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.15□□□□□ -1.74
Trim58Q5NCC9 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm24792-201ENSMUST00000104286 128 ntBASIC4.15□□□□□ -1.75
Trim58Q5NCC9 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm12739-201ENSMUST00000119769 382 ntBASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm14589-201ENSMUST00000121640 727 ntBASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm16359-201ENSMUST00000124511 289 ntBASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm25966-201ENSMUST00000157169 117 ntBASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Trim58Q5NCC9 Gm27538-201ENSMUST00000185065 294 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms