Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Mir323-201ENSMUST00000083683 86 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC9.47□□□□□ -0.89
Trim41Q5NCC3 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Trim41Q5NCC3 AC112972.2-201ENSMUST00000228702 2210 ntBASIC9.46□□□□□ -0.89
Trim41Q5NCC3 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Trim41Q5NCC3 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm13250-201ENSMUST00000117209 753 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm15223-201ENSMUST00000120989 826 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Trav20-201ENSMUST00000142754 347 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm22501-201ENSMUST00000158981 127 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm20630-201ENSMUST00000177387 551 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm29014-201ENSMUST00000191422 326 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm18964-201ENSMUST00000193013 563 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm38053-201ENSMUST00000193938 160 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm43418-201ENSMUST00000201334 428 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm6051-201ENSMUST00000201529 352 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 AC139750.2-201ENSMUST00000224424 386 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 AC123860.1-201ENSMUST00000228033 481 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm37738-201ENSMUST00000192396 4716 ntBASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC9.46□□□□□ -0.9
Trim41Q5NCC3 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim41Q5NCC3 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 AC124586.1-201ENSMUST00000221673 2795 ntBASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Gm24605-201ENSMUST00000104772 96 ntBASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Gm25749-201ENSMUST00000175485 111 ntBASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Gm27148-201ENSMUST00000185086 160 ntBASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 AC161609.1-201ENSMUST00000225878 474 ntBASIC9.45□□□□□ -0.9
Trim41Q5NCC3 AC112935.1-201ENSMUST00000227603 250 ntBASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Gm23875-201ENSMUST00000083711 318 ntBASIC9.45□□□□□ -0.9
Trim41Q5NCC3 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trim41Q5NCC3 CT009480.3-201ENSMUST00000224051 3032 ntBASIC9.45□□□□□ -0.9
Trim41Q5NCC3 AC154354.1-201ENSMUST00000224585 2109 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm14849-201ENSMUST00000122293 2846 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm38128-201ENSMUST00000192085 3250 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm15583-201ENSMUST00000116191 3510 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm21959-201ENSMUST00000178439 452 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm11395-201ENSMUST00000181011 499 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm11394-201ENSMUST00000181421 517 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm27387-201ENSMUST00000184583 116 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm19637-201ENSMUST00000185933 579 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm29665-201ENSMUST00000191457 528 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm26454-201ENSMUST00000082682 107 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm37970-201ENSMUST00000193865 1732 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm42869-201ENSMUST00000199953 2121 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Gm42729-201ENSMUST00000201770 2930 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC9.44□□□□□ -0.9
Trim41Q5NCC3 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Gm37435-201ENSMUST00000192078 3947 ntBASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Gm26085-201ENSMUST00000157900 116 ntBASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 126.7 ms