Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.65□□□□□ -1.83
Usp28Q5I043 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Usp28Q5I043 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Usp28Q5I043 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Usp28Q5I043 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Usp28Q5I043 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Usp28Q5I043 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm25647-201ENSMUST00000101832 78 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm25823-201ENSMUST00000101995 78 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm9432-201ENSMUST00000117810 759 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm11408-201ENSMUST00000117889 519 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm12507-201ENSMUST00000119155 415 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm14977-201ENSMUST00000121626 812 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Mup-ps15-201ENSMUST00000121741 539 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm25150-201ENSMUST00000157121 60 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm25058-201ENSMUST00000157365 128 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm26487-201ENSMUST00000158022 94 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm24213-201ENSMUST00000158255 258 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm25898-201ENSMUST00000158303 106 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.64□□□□□ -1.83
Usp28Q5I043 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Mir3104-201ENSMUST00000174911 63 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm24220-201ENSMUST00000177753 79 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm25988-201ENSMUST00000177759 79 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm23471-201ENSMUST00000177886 79 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm26488-201ENSMUST00000178225 79 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm23449-201ENSMUST00000179208 79 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm25221-201ENSMUST00000180051 79 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm29513-201ENSMUST00000185741 202 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm29704-201ENSMUST00000196011 253 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm43841-201ENSMUST00000199491 586 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm45080-201ENSMUST00000206648 283 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 AC159293.2-201ENSMUST00000222289 424 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Usp28Q5I043 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Usp28Q5I043 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.64□□□□□ -1.83
Usp28Q5I043 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
Usp28Q5I043 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Usp28Q5I043 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.63□□□□□ -1.83
Usp28Q5I043 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Usp28Q5I043 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm14622-201ENSMUST00000117117 468 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm15161-201ENSMUST00000117340 387 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm12392-201ENSMUST00000118014 938 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm14352-201ENSMUST00000119250 449 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm12880-201ENSMUST00000120652 494 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm11350-201ENSMUST00000121436 870 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm26477-201ENSMUST00000122617 323 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm24002-201ENSMUST00000158456 104 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm26061-201ENSMUST00000175584 108 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm27535-201ENSMUST00000183814 157 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.63□□□□□ -1.83
Usp28Q5I043 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Usp28Q5I043 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm21089-201ENSMUST00000215843 325 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm19987-201ENSMUST00000216339 499 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.63□□□□□ -1.83
Usp28Q5I043 Platr25-208ENSMUST00000222602 939 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm10161-201ENSMUST00000091506 204 ntBASIC3.63□□□□□ -1.83
Usp28Q5I043 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Usp28Q5I043 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Usp28Q5I043 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Usp28Q5I043 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Usp28Q5I043 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.62□□□□□ -1.83
Usp28Q5I043 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.62□□□□□ -1.83
Usp28Q5I043 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Usp28Q5I043 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Usp28Q5I043 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Usp28Q5I043 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Usp28Q5I043 Gm12106-201ENSMUST00000116006 1200 ntBASIC3.62□□□□□ -1.83
Usp28Q5I043 Gm12448-201ENSMUST00000118852 655 ntBASIC3.62□□□□□ -1.83
Usp28Q5I043 Gm11260-201ENSMUST00000121163 942 ntBASIC3.62□□□□□ -1.83
Usp28Q5I043 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.62□□□□□ -1.83
Usp28Q5I043 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.62□□□□□ -1.83
Usp28Q5I043 Gm16274-201ENSMUST00000139251 592 ntBASIC3.62□□□□□ -1.83
Usp28Q5I043 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Usp28Q5I043 Samd15-201ENSMUST00000169669 1194 ntBASIC3.62□□□□□ -1.83
Usp28Q5I043 Mir5112-201ENSMUST00000174897 60 ntBASIC3.62□□□□□ -1.83
Usp28Q5I043 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.62□□□□□ -1.83
Usp28Q5I043 Gm28654-201ENSMUST00000189801 379 ntBASIC3.62□□□□□ -1.83
Usp28Q5I043 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.62□□□□□ -1.83
Usp28Q5I043 Gm17966-201ENSMUST00000193453 594 ntBASIC3.62□□□□□ -1.83
Usp28Q5I043 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms