Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm18327-201ENSMUST00000202426 830 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm44058-201ENSMUST00000204335 467 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm8681-201ENSMUST00000219115 618 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm23447-201ENSMUST00000082798 163 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm25699-201ENSMUST00000082896 167 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Mir465-201ENSMUST00000093563 74 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm21286-201ENSMUST00000098035 545 ntBASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Trim40Q3UWA4 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm13650-201ENSMUST00000117729 433 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm12118-201ENSMUST00000119766 532 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm12287-201ENSMUST00000119770 707 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm22478-201ENSMUST00000122570 154 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm14527-201ENSMUST00000179300 639 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm25412-201ENSMUST00000180258 107 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm27414-201ENSMUST00000185033 381 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm28385-201ENSMUST00000185671 292 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm5731-201ENSMUST00000190969 481 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm9375-201ENSMUST00000208899 903 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm18645-201ENSMUST00000209593 651 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 AC154198.1-201ENSMUST00000222839 424 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Mir383-201ENSMUST00000083523 70 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.57□□□□□ -1.84
Trim40Q3UWA4 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim40Q3UWA4 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 AC134860.3-201ENSMUST00000223564 1300 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm11252-201ENSMUST00000120572 939 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm14473-201ENSMUST00000122269 557 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm23123-201ENSMUST00000157648 144 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm24727-201ENSMUST00000158231 144 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm8161-201ENSMUST00000168739 481 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms