Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.58□□□□□ -1.84
Trafd1Q3UDK1 Gm23063-201ENSMUST00000102350 93 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm25727-201ENSMUST00000104522 131 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm12090-201ENSMUST00000118692 758 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm12458-201ENSMUST00000119387 495 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm26171-201ENSMUST00000158422 131 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm28788-201ENSMUST00000189717 375 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm29558-201ENSMUST00000190134 375 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm28466-201ENSMUST00000190678 659 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm38098-201ENSMUST00000194115 241 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Mir703-201ENSMUST00000197105 109 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm43841-201ENSMUST00000199491 586 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm44294-201ENSMUST00000205090 728 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Gm18338-201ENSMUST00000222381 560 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trafd1Q3UDK1 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm12387-201ENSMUST00000118573 955 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm6373-201ENSMUST00000121026 360 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm12858-201ENSMUST00000121913 208 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm15089-201ENSMUST00000122332 1196 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm13868-201ENSMUST00000122411 294 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm7846-201ENSMUST00000145844 274 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm23865-201ENSMUST00000157723 97 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm25606-201ENSMUST00000158363 95 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Mir6408-201ENSMUST00000183643 91 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm28745-201ENSMUST00000190069 305 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm37111-201ENSMUST00000193250 634 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm18340-201ENSMUST00000196342 609 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm18429-201ENSMUST00000198707 421 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm19540-201ENSMUST00000221843 810 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 CT009733.1-203ENSMUST00000224033 451 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm7204-201ENSMUST00000062591 600 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm22043-201ENSMUST00000082993 158 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm10704-201ENSMUST00000098952 730 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.56□□□□□ -1.84
Trafd1Q3UDK1 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trafd1Q3UDK1 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms