Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm8145-201ENSMUST00000118220 745 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm14852-201ENSMUST00000120065 647 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm14867-201ENSMUST00000120156 866 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm15142-201ENSMUST00000121013 856 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm12466-201ENSMUST00000121199 620 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm22601-201ENSMUST00000157595 250 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm24690-201ENSMUST00000157759 97 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm24847-201ENSMUST00000158032 108 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm24901-201ENSMUST00000158125 110 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm24737-201ENSMUST00000158861 100 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm25451-201ENSMUST00000177832 121 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Mir6418-201ENSMUST00000185075 115 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm28418-201ENSMUST00000186179 423 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm37418-201ENSMUST00000195031 274 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Mir5121-201ENSMUST00000198528 74 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm44634-201ENSMUST00000206119 152 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm44648-201ENSMUST00000208267 329 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm7753-201ENSMUST00000221007 867 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Gm22265-201ENSMUST00000082947 116 ntBASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Usp39Q3TIX9 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
Usp39Q3TIX9 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Usp39Q3TIX9 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Usp39Q3TIX9 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm22899-201ENSMUST00000104540 131 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm24275-201ENSMUST00000116780 146 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm14001-201ENSMUST00000118847 247 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm16106-201ENSMUST00000119187 294 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm9225-201ENSMUST00000121921 836 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm15905-201ENSMUST00000137042 298 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm25278-201ENSMUST00000157267 120 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm23121-201ENSMUST00000157653 173 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm22383-201ENSMUST00000158188 327 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Mir1947-201ENSMUST00000158235 85 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm23068-201ENSMUST00000158239 293 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm25605-201ENSMUST00000158364 124 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm15974-201ENSMUST00000159103 531 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm16290-201ENSMUST00000161175 474 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm8214-201ENSMUST00000172123 351 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm29086-201ENSMUST00000186774 222 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm29085-201ENSMUST00000187108 225 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm43494-201ENSMUST00000197672 388 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm18100-201ENSMUST00000200897 452 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm44927-201ENSMUST00000207573 716 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm45857-201ENSMUST00000212207 356 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm20304-201ENSMUST00000218168 444 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm8724-201ENSMUST00000081668 483 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.58□□□□□ -1.68
Usp39Q3TIX9 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms