Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm8790-201ENSMUST00000194108 322 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm7299-201ENSMUST00000194441 581 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm4644-201ENSMUST00000197587 400 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm42758-201ENSMUST00000202146 283 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm20039-201ENSMUST00000210329 394 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm8423-201ENSMUST00000211387 607 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm16419-201ENSMUST00000221057 625 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm23104-201ENSMUST00000083722 104 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ptchd3Q0EEE2 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm12656-201ENSMUST00000118149 577 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm13059-201ENSMUST00000119881 398 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm14534-201ENSMUST00000120045 357 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm14989-201ENSMUST00000120497 207 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm13852-201ENSMUST00000122350 242 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm11506-201ENSMUST00000122414 470 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm26476-201ENSMUST00000122618 313 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm25295-201ENSMUST00000122794 306 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm16250-201ENSMUST00000148974 256 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm23782-201ENSMUST00000157939 120 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm22726-201ENSMUST00000158089 179 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm17061-201ENSMUST00000163167 499 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Mir6414-201ENSMUST00000183685 82 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm27233-201ENSMUST00000184030 307 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Mir6943-201ENSMUST00000185186 66 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm5552-201ENSMUST00000197149 515 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm8745-201ENSMUST00000207846 782 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm45696-201ENSMUST00000212088 985 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm45727-201ENSMUST00000212886 572 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm5175-202ENSMUST00000219699 529 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Mir34b-201ENSMUST00000083558 84 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ptchd3Q0EEE2 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms