Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm4912-201ENSMUST00000122212 1044 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.02□□□□□ -1.45
Col9a1Q05722 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm23031-201ENSMUST00000157998 119 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm25615-201ENSMUST00000177836 94 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm25024-201ENSMUST00000179667 104 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm5430-201ENSMUST00000182525 915 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm3145-201ENSMUST00000188584 220 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm37713-201ENSMUST00000191746 198 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm37878-201ENSMUST00000192108 387 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm43524-201ENSMUST00000197278 298 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm44391-201ENSMUST00000198490 93 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm18540-201ENSMUST00000204025 526 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.02□□□□□ -1.45
Col9a1Q05722 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.02□□□□□ -1.45
Col9a1Q05722 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col9a1Q05722 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Col9a1Q05722 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col9a1Q05722 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col9a1Q05722 Gm650-201ENSMUST00000144428 1551 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.01□□□□□ -1.45
Col9a1Q05722 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col9a1Q05722 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Col9a1Q05722 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col9a1Q05722 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col9a1Q05722 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col9a1Q05722 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Col9a1Q05722 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm18189-201ENSMUST00000218153 1951 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm11065-201ENSMUST00000111462 228 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm23178-201ENSMUST00000116782 95 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm14845-201ENSMUST00000121259 306 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm14977-201ENSMUST00000121626 812 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm17152-201ENSMUST00000172430 535 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm25121-201ENSMUST00000179846 79 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm37617-201ENSMUST00000194309 159 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.01□□□□□ -1.45
Col9a1Q05722 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.01□□□□□ -1.45
Col9a1Q05722 AC158803.3-201ENSMUST00000220024 211 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC6.01□□□□□ -1.45
Col9a1Q05722 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
Col9a1Q05722 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col9a1Q05722 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col9a1Q05722 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col9a1Q05722 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col9a1Q05722 Gm44822-201ENSMUST00000208559 6389 ntBASIC6.01□□□□□ -1.45
Col9a1Q05722 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col9a1Q05722 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
Col9a1Q05722 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6□□□□□ -1.45
Col9a1Q05722 Gm36989-201ENSMUST00000193225 2160 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col9a1Q05722 Gm6061-201ENSMUST00000175860 492 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Gm5558-201ENSMUST00000178933 495 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6□□□□□ -1.45
Col9a1Q05722 Mir6393-201ENSMUST00000183709 94 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Gm27679-201ENSMUST00000184612 84 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6□□□□□ -1.45
Col9a1Q05722 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Gm42453-201ENSMUST00000200477 409 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col9a1Q05722 Gm43991-201ENSMUST00000203751 274 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC6□□□□□ -1.45
Col9a1Q05722 AC150901.1-201ENSMUST00000208407 145 ntBASIC6□□□□□ -1.45
Col9a1Q05722 Gm44657-201ENSMUST00000208568 450 ntBASIC6□□□□□ -1.45
Col9a1Q05722 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6□□□□□ -1.45
Col9a1Q05722 AC115793.1-201ENSMUST00000216605 215 ntBASIC6□□□□□ -1.45
Col9a1Q05722 AC167420.1-201ENSMUST00000222999 2121 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms