Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Crs-ps-201ENSMUST00000203723 760 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm44002-201ENSMUST00000205134 594 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col8a1Q00780 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 AC160863.1-201ENSMUST00000218412 317 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm18507-201ENSMUST00000218855 525 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC4.42□□□□□ -1.7
Col8a1Q00780 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm9309-201ENSMUST00000223537 546 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Snord68-201ENSMUST00000082516 86 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm24610-201ENSMUST00000083270 109 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Rny1-201ENSMUST00000083767 112 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm10222-201ENSMUST00000088336 294 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.42□□□□□ -1.7
Col8a1Q00780 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col8a1Q00780 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Col8a1Q00780 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Mir208b-201ENSMUST00000104735 77 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm22468-201ENSMUST00000116680 120 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm26248-201ENSMUST00000116700 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm26137-201ENSMUST00000116701 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm26190-201ENSMUST00000116704 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm24617-201ENSMUST00000116705 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm25778-201ENSMUST00000116713 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm25774-201ENSMUST00000116717 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm22102-201ENSMUST00000116730 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm23177-201ENSMUST00000116784 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm24193-201ENSMUST00000116801 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm24744-201ENSMUST00000116833 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm24427-201ENSMUST00000116896 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm22346-201ENSMUST00000116918 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm23606-201ENSMUST00000116938 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm22029-201ENSMUST00000116940 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm26298-201ENSMUST00000116956 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm23844-201ENSMUST00000116959 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm24484-201ENSMUST00000117009 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm25347-201ENSMUST00000117026 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm22112-201ENSMUST00000117032 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm14933-201ENSMUST00000118840 481 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm15177-201ENSMUST00000120491 577 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm22791-201ENSMUST00000157232 145 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm27579-201ENSMUST00000158113 63 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Scarna10-201ENSMUST00000158992 325 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm6486-201ENSMUST00000166202 434 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm22991-201ENSMUST00000178126 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm21959-201ENSMUST00000178439 452 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm25754-201ENSMUST00000178653 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm22419-201ENSMUST00000178780 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm24802-201ENSMUST00000178897 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm25208-201ENSMUST00000178964 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm24567-201ENSMUST00000179294 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm23943-201ENSMUST00000179712 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm25228-201ENSMUST00000180121 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm23304-201ENSMUST00000180209 121 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm8941-201ENSMUST00000181451 899 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm27564-201ENSMUST00000185196 96 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm28506-201ENSMUST00000189937 150 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm38185-201ENSMUST00000193195 694 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm18551-201ENSMUST00000195594 642 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm36985-201ENSMUST00000195595 379 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm35876-201ENSMUST00000205044 459 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm44779-201ENSMUST00000206937 708 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm19921-201ENSMUST00000210505 703 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.41□□□□□ -1.7
Col8a1Q00780 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.41□□□□□ -1.7
Col8a1Q00780 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms