Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.06□□□□□ -1.6
Hmgb1P63158 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Hmgb1P63158 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm43665-201ENSMUST00000198672 1659 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb1P63158 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Hmgb1P63158 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb1P63158 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm12268-201ENSMUST00000118398 442 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm5391-201ENSMUST00000121155 613 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm22521-201ENSMUST00000158272 134 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm26271-201ENSMUST00000158349 104 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm2617-201ENSMUST00000185690 1066 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm18956-201ENSMUST00000192857 480 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.05□□□□□ -1.6
Hmgb1P63158 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm18306-201ENSMUST00000207338 569 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Hmgb1P63158 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm8942-201ENSMUST00000217892 400 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.05□□□□□ -1.6
Hmgb1P63158 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Gm23516-201ENSMUST00000093728 107 ntBASIC5.05□□□□□ -1.6
Hmgb1P63158 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hmgb1P63158 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC5.05□□□□□ -1.6
Hmgb1P63158 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Hmgb1P63158 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Hmgb1P63158 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Hmgb1P63158 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb1P63158 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hmgb1P63158 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm13451-201ENSMUST00000117649 592 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm12760-201ENSMUST00000117861 482 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm24517-201ENSMUST00000122560 107 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm23327-201ENSMUST00000157420 78 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm24241-201ENSMUST00000157787 145 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm24534-201ENSMUST00000157949 291 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm24636-201ENSMUST00000158673 288 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm16545-201ENSMUST00000161968 463 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm5258-201ENSMUST00000165437 327 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm5527-201ENSMUST00000179821 642 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm27543-201ENSMUST00000183562 177 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm28830-201ENSMUST00000188192 213 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm37987-201ENSMUST00000194999 825 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm18748-201ENSMUST00000198507 622 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm43198-201ENSMUST00000200927 326 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm43810-201ENSMUST00000201018 232 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm32308-201ENSMUST00000203053 280 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm44038-201ENSMUST00000203952 889 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm29817-201ENSMUST00000210098 172 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb1P63158 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb1P63158 CT030135.1-201ENSMUST00000223760 570 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm10916-201ENSMUST00000080330 483 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb1P63158 Olfr713-201ENSMUST00000098139 975 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb1P63158 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hmgb1P63158 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Hmgb1P63158 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.04□□□□□ -1.6
Hmgb1P63158 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC5.04□□□□□ -1.6
Hmgb1P63158 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC5.03□□□□□ -1.6
Hmgb1P63158 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb1P63158 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm37387-201ENSMUST00000192201 1806 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Hmgb1P63158 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm25919-201ENSMUST00000104271 132 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm11943-201ENSMUST00000119473 327 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm24751-201ENSMUST00000157844 102 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm25906-201ENSMUST00000158489 126 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb1P63158 Gm20612-201ENSMUST00000176318 236 ntBASIC5.03□□□□□ -1.6
Hmgb1P63158 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms