Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cux1P53564 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Cux1P53564 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Cux1P53564 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Cux1P53564 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Cux1P53564 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Cux1P53564 Gm12739-201ENSMUST00000119769 382 ntBASIC4.65□□□□□ -1.67
Cux1P53564 Gm8430-201ENSMUST00000119780 471 ntBASIC4.65□□□□□ -1.67
Cux1P53564 Gm13581-201ENSMUST00000120675 278 ntBASIC4.65□□□□□ -1.67
Cux1P53564 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.65□□□□□ -1.67
Cux1P53564 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC4.65□□□□□ -1.67
Cux1P53564 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.64□□□□□ -1.67
Cux1P53564 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.64□□□□□ -1.67
Cux1P53564 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Cux1P53564 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cux1P53564 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.64□□□□□ -1.67
Cux1P53564 Gm37433-201ENSMUST00000192695 678 ntBASIC4.64□□□□□ -1.67
Cux1P53564 Gm37441-201ENSMUST00000194430 678 ntBASIC4.64□□□□□ -1.67
Cux1P53564 Gm18445-201ENSMUST00000195502 774 ntBASIC4.64□□□□□ -1.67
Cux1P53564 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cux1P53564 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.64□□□□□ -1.67
Cux1P53564 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Cux1P53564 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cux1P53564 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cux1P53564 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Cux1P53564 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
Cux1P53564 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.64□□□□□ -1.67
Cux1P53564 AC164297.4-201ENSMUST00000224225 1307 ntBASIC4.63□□□□□ -1.67
Cux1P53564 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cux1P53564 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cux1P53564 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cux1P53564 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cux1P53564 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cux1P53564 Gm43478-201ENSMUST00000200381 292 ntBASIC4.63□□□□□ -1.67
Cux1P53564 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cux1P53564 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cux1P53564 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Cux1P53564 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cux1P53564 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cux1P53564 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cux1P53564 Gm11970-201ENSMUST00000116105 320 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Gm16445-201ENSMUST00000120399 714 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC4.62□□□□□ -1.67
Cux1P53564 Gm25528-201ENSMUST00000180264 132 ntBASIC4.62□□□□□ -1.67
Cux1P53564 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cux1P53564 Snord14e-201ENSMUST00000082857 90 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cux1P53564 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Cux1P53564 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cux1P53564 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cux1P53564 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cux1P53564 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cux1P53564 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cux1P53564 Gm11456-201ENSMUST00000121070 256 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Gm16218-201ENSMUST00000155424 388 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.62□□□□□ -1.67
Cux1P53564 Gm6245-201ENSMUST00000164699 768 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Gm3370-201ENSMUST00000171785 500 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Mir3103-201ENSMUST00000175474 67 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Gm43992-201ENSMUST00000204358 197 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC4.62□□□□□ -1.67
Cux1P53564 Gm44688-201ENSMUST00000209083 537 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Gm19232-201ENSMUST00000211621 652 ntBASIC4.62□□□□□ -1.67
Cux1P53564 AC168059.2-201ENSMUST00000224473 333 ntBASIC4.62□□□□□ -1.67
Cux1P53564 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Cux1P53564 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cux1P53564 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.61□□□□□ -1.67
Cux1P53564 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Cux1P53564 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Cux1P53564 Gm13717-201ENSMUST00000119868 365 ntBASIC4.61□□□□□ -1.67
Cux1P53564 Gm12723-201ENSMUST00000120700 451 ntBASIC4.61□□□□□ -1.67
Cux1P53564 Gm25270-201ENSMUST00000122606 138 ntBASIC4.61□□□□□ -1.67
Cux1P53564 Gm24240-201ENSMUST00000157785 135 ntBASIC4.61□□□□□ -1.67
Cux1P53564 Ighv8-1-201ENSMUST00000194897 291 ntBASIC4.61□□□□□ -1.67
Cux1P53564 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cux1P53564 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC4.61□□□□□ -1.67
Cux1P53564 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.61□□□□□ -1.67
Cux1P53564 Gm24446-201ENSMUST00000083982 156 ntBASIC4.61□□□□□ -1.67
Cux1P53564 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cux1P53564 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cux1P53564 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Cux1P53564 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cux1P53564 Gm25466-201ENSMUST00000103995 132 ntBASIC4.6□□□□□ -1.67
Cux1P53564 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC4.6□□□□□ -1.67
Cux1P53564 Gm12677-201ENSMUST00000118668 426 ntBASIC4.6□□□□□ -1.67
Cux1P53564 Gm9078-201ENSMUST00000119126 617 ntBASIC4.6□□□□□ -1.67
Cux1P53564 Gm22908-201ENSMUST00000177620 110 ntBASIC4.6□□□□□ -1.67
Cux1P53564 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC4.6□□□□□ -1.67
Cux1P53564 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.6□□□□□ -1.67
Cux1P53564 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC4.6□□□□□ -1.67
Cux1P53564 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.6□□□□□ -1.67
Cux1P53564 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cux1P53564 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cux1P53564 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cux1P53564 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Cux1P53564 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cux1P53564 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.59□□□□□ -1.67
Cux1P53564 Gm28614-201ENSMUST00000186483 458 ntBASIC4.59□□□□□ -1.67
Cux1P53564 Gm20997-201ENSMUST00000205148 231 ntBASIC4.59□□□□□ -1.67
Cux1P53564 Gm45778-201ENSMUST00000211959 153 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms